Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2119 302 4e-77 >seq2119 Length=607893 Score = 302 bits (334), Expect = 4e-77 Identities = 602/887 (68%), Gaps = 15/887 (2%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| ||||| |||| ||||||||| || || ||||| || | | ||||| || Sbjct 161102 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 161043 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 |||||||| || || ||||| || ||| ||| |||||||| || || | || Sbjct 161042 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACATCCTAATGCAATCAGT 160983 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 | || || || ||||| || | |||||| | ||| | || || || || | || Sbjct 160982 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 160923 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496 | |||||||| |||| || || | | | ||| ||| |||||||| || || || Sbjct 160922 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATT 160863 Query 4497 TCTTTTA---TTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 | | | | |||| || | | ||| | || || | | ||| | ||||| ||| Sbjct 160862 TGTCTGACAATTTTTTCGTCTGG-GGTATGGTTC--AAATGTGAAAAGAGCAAACAAGCA 160806 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 ||||| ||| |||||||| ||||| | |||||| ||||| || ||||| || || ||| Sbjct 160805 AAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGC 160746 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || |||||||||||||| | ||| || || | |||||||| ||||| ||||| || ||| Sbjct 160745 ATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCT 160686 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCAT 4733 || || || ||||| || || || | | ||| | |||| ||| ||||||| Sbjct 160685 TCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCAT 160626 Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT--- 4790 ||||| ||||| | || |||| ||| | || || ||||| | || || || ||| Sbjct 160625 TTTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAG 160566 Query 4791 AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850 |||| || |||| ||| |||| || ||||| || || | || ||| |||| Sbjct 160565 AATTCAC---TTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCC 160509 Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910 ||||| || ||||| || ||| || || || || || ||| |||| |||| | |||| Sbjct 160508 GAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGA 160449 Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970 || || | | || | || ||||| ||||| || |||||||| ||| || ||||| Sbjct 160448 ACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAG 160389 Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGG 5027 ||||| | ||| || || ||| | ||| | || | | || ||||| | Sbjct 160388 AACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCA 160329 Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087 |||||||||| | | ||||| ||| || ||||||| || || ||||| || || ||| Sbjct 160328 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTG 160269 Query 5088 TACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 ||||| |||||| || |||||| || |||| | ||||| || Sbjct 160268 TACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 160222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427036682016506