Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2119 508 8e-139 seq2138 102 1e-16 >seq2119 Length=607893 Score = 508 bits (562), Expect = 8e-139 Identities = 1388/2100 (66%), Gaps = 47/2100 (2%) Strand=Plus/Minus Query 76818 AGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGT 76877 || || |||||||| || || || ||| |||| || |||||||||||| || | | Sbjct 506346 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 506287 Query 76878 TTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCT 76937 || | |||| | ||| || ||||| || || ||||| | | | || Sbjct 506286 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 506227 Query 76938 CCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAA 76997 ||||||||||| ||||| | ||||| |||||||| | || ||||| | ||| || | Sbjct 506226 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 506167 Query 76998 ACTTGTTTGATATCATCTGGAAGGTTTG-TA--TTTTGAATGGAACCACCATCTGATATA 77054 | | ||||| || | |||| || | || || ||||| |||||| |||||| || Sbjct 506166 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 506107 Query 77055 ATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGA 77114 || || || ||| ||||||||| | | | | || |||| |||| | | || | Sbjct 506106 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAA 506047 Query 77115 GGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATAT 77174 || || || || || ||||| || | || ||||| | || ||||||||| || || Sbjct 506046 GGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 505987 Query 77175 GGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCC 77234 ||||| | |||| |||| || | |||||||| || |||||||| ||||| ||||| Sbjct 505986 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 505927 Query 77235 ACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCC 77294 || | || |||||| | ||||| | ||||||| || |||| | | ||| || Sbjct 505926 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 505867 Query 77295 CAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT 77354 | | | | || | |||||||||| | ||||| | || | ||| Sbjct 505866 TATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGA 505807 Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 ||||| | | | || ||||| ||||| || | || || |||| ||| || ||||| Sbjct 505806 GATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAA 505747 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 || | | |||||| ||||| ||||| | |||| || || | |||||| |||| Sbjct 505746 GCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCA 505687 Query 77475 AACGGATAATGTAAA-AGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 || || |||| | || | || ||||||||||| || || || || |||| | |||| || Sbjct 505686 AATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGG 505628 Query 77534 TCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAAT 77593 ||| | |||| |||| || | | || | || |||||| || || | || || || Sbjct 505627 TCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTATCGATGAT 505568 Query 77594 TTTATTGAGATTTCTA---ACAACTACTTTAAC--CACGTCCTTT-----AGTTTAAGAA 77643 |||||| | ||| || ||||| | ||| || || || |||| | | Sbjct 505567 TTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCA 505508 Query 77644 AATCAAATCTTC-CATCTAT---AACAAA--CATGTTCAAAGCTATAGATGCTAGATTAC 77697 | || |||| |||| | |||||| || | ||| || | | |||| ||||| Sbjct 505507 A--CAGTTCTTGTCATCACTTTCAACAAATGCAGG--CAATGCAACACTAGCTAAATTAC 505452 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 |||||||| || | || | ||||| | || || |||| ||| | ||| Sbjct 505451 AAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATT 505392 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAA 77817 ||||| |||| ||||||||| || || || || |||| |||||||| | || | Sbjct 505391 TGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGA 505332 Query 77818 ACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG--CTTT 77875 | || || || |||||| | || | ||| | || || | ||| | ||| | | |||| Sbjct 505331 AAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATA--ACTTTTGTGCTTT 505274 Query 77876 TATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATC 77935 || | || || | ||||||||||||| ||||||| || |||||||| Sbjct 505273 AATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATC 505214 Query 77936 TCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATC 77995 || | |||||| ||| ||||| |||| | ||| | | || | ||| || ||| Sbjct 505213 ACCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATT 505154 Query 77996 TTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGT 78055 || || ||||| || |||||| | |||||| ||||||| |||| |||| ||||| | Sbjct 505153 TTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGC 505094 Query 78056 TCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATG 78115 |||| |||||| || || || || | | ||| | ||| || | |||||| ||||| Sbjct 505093 TCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATG 505034 Query 78116 CCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATA 78175 ||| || || | ||||| ||| | | ||||||| ||||||||| || || || | ||| Sbjct 505033 CCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATA 504974 Query 78176 TCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGT 78235 || || ||||||||| | || || | |||||||||||| || || ||||| ||||| || Sbjct 504973 CCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGT 504914 Query 78236 TCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGC 78295 || | ||||||| ||| ||| | ||||||| || || ||| || || || || Sbjct 504913 ACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGC 504854 Query 78296 CATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATC 78355 | || || || | ||| || |||||| ||||| |||||||| || || || || Sbjct 504853 AGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTC 504794 Query 78356 CATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAA 78415 | |||| || | ||||| ||||||||||| ||| || | ||| || | Sbjct 504793 CTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAG 504734 Query 78416 TGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGA 78475 || ||||| ||||| || || | | | || | | ||| || ||||||||| | || Sbjct 504733 AGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGA 504674 Query 78476 TTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535 || || || |||||| || || || || | ||| | | ||| || || ||||| Sbjct 504673 ATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTC 504614 Query 78536 AACCGTCTTATTATTTATTTTCAACAAGTATGATT--TTTCCAAAGTTTTAAAACCAAAA 78593 | ||||| ||||||| | || ||| || | | |||| || ||||| ||||||||| Sbjct 504613 GGCAATCTTACCATTTATTCTTAA-AAG-ATAACTCCTTTCTAATGTTTTGAAACCAAAA 504556 Query 78594 TAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTAT---CTTTGTAT 78650 ||||| || |||||||| || ||| ||| || || || | ||| | || | | Sbjct 504555 TAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCGCATT-TTT 504497 Query 78651 TTGGTAACAATAT-CCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGG 78709 |||| ||||| | ||| | | ||||||| || |||| || |||||||||||| Sbjct 504496 TTGG--ACAATTTCCCAAGTC-TCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGG 504440 Query 78710 ATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTG 78769 || || ||| || ||| | | | || ||| ||| || |||||| ||| || Sbjct 504439 ATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTG 504380 Query 78770 TAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG--TTG-TGTAGT 78826 || || || | || | ||| ||||| | | |||||||| ||||| | | ||| | Sbjct 504379 TAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCAT 504320 Query 78827 ACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATA 78886 | || || || |||| || |||||| ||||||| || | |||||| || |||| ||| Sbjct 504319 ATAA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 504263 Score = 248 bits (274), Expect = 1e-60 Identities = 579/866 (67%), Gaps = 18/866 (2%) Strand=Plus/Minus Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930 || |||||||| || ||||| || | | || || || |||||||| || |||||||| Sbjct 161081 TTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAATGGATTT 161022 Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGT---CTATCTGCAACGAAT 47987 | | || | |||| | |||||||| | ||||||| ||||||||||| || Sbjct 161021 GTAACGTCGTATACCTTTTCACATCCTAATGC---AATCAGTAGTCTATCTGCAACAAAC 160965 Query 47988 TCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCC 48047 || | ||| ||||| || |||||| || | | || || ||||| || || Sbjct 160964 TCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCGTCA 160905 Query 48048 GT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTC 48106 || ||| | |||| ||| ||| || || || || || | | || ||| || Sbjct 160904 GTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTTTC 160846 Query 48107 ACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTC 48166 ||| | || ||||||| ||| | ||||| |||||||| ||| | |||||| Sbjct 160845 GTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAACCTTC 160786 Query 48167 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAG 48226 |||||||| ||| | ||||| || || || | ||| ||||| | || | ||||| | Sbjct 160785 ATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAA 160726 Query 48227 CCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGT 48286 ||| || || | || || || ||||| ||||| || ||||| || || |||||||| Sbjct 160725 CCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCAC 160666 Query 48287 AAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTT 48343 | |||||| | | || || || | | ||||| | ||||| || ||||| Sbjct 160665 CAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGGCCTT 160606 Query 48344 CTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATC 48403 | ||| | ||| || |||||||| || ||||| || | || | |||| || ||| Sbjct 160605 TTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTGGATC 160546 Query 48404 TTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCAT 48463 ||| | ||||||||| || || | | ||| |||| || ||||| ||||| || || Sbjct 160545 TTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCATAAT 160486 Query 48464 CTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGT--ACAAAATCGTTCA 48521 || || || || |||||| | || |||| || || || || | | ||| || ||| Sbjct 160485 TTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTC--TCA 160428 Query 48522 GCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATA 48581 | ||||| ||||| ||||| |||||| ||||||||| || |||| || | ||| Sbjct 160427 ACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATG 160368 Query 48582 AAATATTTTTCGTTGGAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCT 48638 || || |||| || ||| | || ||||| |||| | |||||| || | ||| Sbjct 160367 AAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCA 160308 Query 48639 ACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTG 48698 | ||| || || ||||| || ||||| ||||| || || ||||| | ||| || || Sbjct 160307 ATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGA 160248 Query 48699 TATTGGATTGGGAAAATAACAAATCT 48724 || | |||||| || | |||||| || Sbjct 160247 TACTTGATTGGAAAGAGAACAAACCT 160222 >seq2138 Length=166447 Score = 102 bits (112), Expect = 1e-16 Identities = 180/260 (69%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 ||| || | ||| || ||||||||||||||||||| ||||| | ||| |||||| || Sbjct 15180 CATGAACATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTT 15239 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || |||||| | | || |||||| || | || |||| ||||||||| |||| ||| Sbjct 15240 CCCATGATTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATA 15299 Query 78131 TATTGCCATA-ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189 || ||| | | | || |||| ||| || || ||||| || | |||| || || || Sbjct 15300 TA-TGCAAAATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAAT 15358 Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAAC 78249 | | ||| | ||||| || || | |||| || | ||||| | || || ||| Sbjct 15359 TGAATACTTTTAACATAGGGATTAAACCGGATGAAATCCCATTACTACCGTTGATGTAAG 15418 Query 78250 TTCCACTTGCGCGAATATTA 78269 | ||||| || | |||||| Sbjct 15419 TACCACTGGCTCTTATATTA 15438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694647247900480