Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2206 145 2e-29 seq2142 140 7e-28 seq2137 96.9 7e-15 >seq2206 Length=14499 Score = 145 bits (160), Expect = 2e-29 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||||||||||| | || | ||||| |||| ||| || || ||||| Sbjct 9145 TTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 9086 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||||||| |||||||| |||||||||||||| || | || || | Sbjct 9085 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATT 9026 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||||||||| || | |||||||| | || || |||||||| || ||||| ||||| Sbjct 9025 GTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAAC 8966 Query 283088 GAATATCTGCATTTT 283102 || || ||||| || Sbjct 8965 AAAAATTTGCATCTT 8951 Score = 145 bits (160), Expect = 2e-29 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||||||||||| | || | ||||| |||| ||| || || ||||| Sbjct 12107 TTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 12048 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||||||| |||||||| |||||||||||||| || | || || | Sbjct 12047 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATT 11988 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||||||||| || | |||||||| | || || |||||||| || ||||| ||||| Sbjct 11987 GTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAAC 11928 Query 283088 GAATATCTGCATTTT 283102 || || ||||| || Sbjct 11927 AAAAATTTGCATCTT 11913 >seq2142 Length=155211 Score = 140 bits (154), Expect = 7e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | | || | ||||| |||| ||| || || ||||| Sbjct 147732 TTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 147673 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||||||| |||||||| ||||| |||||||||||| || || | Sbjct 147672 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATT 147613 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| |||| ||| ||||| | || || |||||||| || || ||||| || Sbjct 147612 GTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGAC 147553 Query 283088 GAATATCTGCATTTT 283102 || || ||||| || Sbjct 147552 AAAAATTTGCATCTT 147538 >seq2137 Length=173579 Score = 96.9 bits (106), Expect = 7e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| ||||| | |||||||| |||| || ||||| | || ||||| ||||||||| Sbjct 22104 GGGAAACCTTCAACTTGACCGTTAGCAATAGCTCTCATTAAGGTGGACTTACCAGCACCA 22163 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148 || || || || | |||||| | | || |||| || | || | || ||||| | Sbjct 22164 TTTGGACCACATAAACCATATCTTCTACCTCTCTTTAGTCTTAATTGAGTCTTGTTTAAC 22223 Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | ||||||| ||||||| || || ||||| ||||| | ||| | ||| || || Sbjct 22224 AAAATCTTAGCACCATAAGCAAGGGAGAATTCACAGTTACATAAGTCTTCACC 22276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046705913039228