Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000764455.1_202014-10-07] 2,482 sequences; 12,940,563 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2119 338 7e-88 >seq2119 Length=607893 Score = 338 bits (374), Expect = 7e-88 Identities = 588/849 (69%), Gaps = 7/849 (1%) Strand=Plus/Minus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 |||||||||| ||||| ||||| | | || || || |||||||| || |||||||| | Sbjct 161080 TTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAATGGATTTG 161021 Query 23300 AAGTATTATATACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAA 23359 | | ||||| || |||| |||| | | | || |||||||| ||||| || | Sbjct 161020 TAACGTCGTATACCTTTTCACATCCTAATGCAATCAGTAGTCTATCTGCAACAAACTCGA 160961 Query 23360 TATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATA 23419 ||| |||||||||||||| | || ||||| | | || || || | || ||| | Sbjct 160960 CATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGA 160901 Query 23420 AGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCACTAG 23479 || || |||||||| ||| || || |||| ||||| | || || ||| | Sbjct 160900 AGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTTTCGTCTG 160841 Query 23480 GTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCC 23539 | | || || |||| ||| | ||||| |||||||| ||||| |||||||| | Sbjct 160840 GGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAACCTTCATCTC 160781 Query 23540 TACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAA 23599 ||| ||||| || || || || || || |||||||| || |||| ||||| | ||| | Sbjct 160780 TACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGA 160721 Query 23600 ATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGAC 23659 | || | |||||||| || || ||||||||||| |||||||| ||||| ||||| | || Sbjct 160720 AGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCA-AC 160662 Query 23660 GTGTAC-CAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAAT 23718 | | |||| |||| | ||| | |||||||||| | ||| | ||||| Sbjct 160661 CTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGGCCTTTTCC 160602 Query 23719 TTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTT 23778 || | ||| |||||||||||||| || || | || |||| | |||| | Sbjct 160601 TTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTGGATCTTTG 160542 Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || || |||||||| | |||| ||| |||| |||||||| ||||| || ||| || Sbjct 160541 ATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGG 160482 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCA-TTAAAAAATCTTTTAGCTAA 23897 |||||||| |||||| |||| || | | |||||||||| || | |||| | | | |||| Sbjct 160481 AACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAAT-TCTCAACTAA 160423 Query 23898 ATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATG 23957 |||||| || || ||||||||| |||||||||||| || ||||| | || || Sbjct 160422 ATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAA 160363 Query 23958 TCTTTCA---TCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTC 24014 ||||||| || | || || |||||||||| | |||||| || | ||||| ||| Sbjct 160362 TCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTC 160303 Query 24015 ATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTG 24074 || | ||||| ||| ||| || ||| |||||| ||||||| || | || | Sbjct 160302 CTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTT 160243 Query 24075 TATTGGAAA 24083 |||||||| Sbjct 160242 GATTGGAAA 160234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521471820834800