Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq546 396 3e-105 seq122 333 3e-86 >seq546 Length=22432 Score = 396 bits (438), Expect = 3e-105 Identities = 1308/2014 (65%), Gaps = 41/2014 (2%) Strand=Plus/Plus Query 52927 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 52986 |||||| ||||||||||| ||||| | | | || || || || |||||||| | || Sbjct 10837 ATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCATATCGAT 10896 Query 52987 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 53045 || |||||||| | || ||||| | ||| ||||| || || ||| || |||| |||| Sbjct 10897 AATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTTGAGGAA 10955 Query 53046 GGTTTG-TA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCAT 53102 || | || |||||||| || ||| |||| || || || || || ||||| Sbjct 10956 TATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAGAATCAT 11015 Query 53103 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 53162 |||| | | | || |||| |||| | | || || ||||| | || ||||| | Sbjct 11016 TCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTAACAATCTGGAATTCAC 11075 Query 53163 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 53222 | | || ||||| | || ||||||||| || || ||||| | | || || | | Sbjct 11076 CGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGTTGTAAC 11135 Query 53223 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 53282 | | |||||||| ||||| ||||||||||| ||||| || | || |||||| | || Sbjct 11136 CTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTCTCAAAC 11195 Query 53283 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TACAAC 53340 | | | ||||||| || |||| | ||||| | | | | | || | || Sbjct 11196 CATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCTTCTTAC 11255 Query 53341 NNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTA 53400 ||||| | ||| | || |||||| || | || || || Sbjct 11256 CCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGTCTCATA 11313 Query 53401 TGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 53460 |||||| ||| | | || |||| ||| ||||| || ||| | | |||||||||||| Sbjct 11314 TGGTCCATCCCTAATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAATGGTTTC 11373 Query 53461 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT-AAGAGAA 53519 || || | |||| || || | |||||| | ||||||||| |||| | || | | Sbjct 11374 AAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCAACATCA 11432 Query 53520 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 53579 | || || ||||| || ||||| ||||||| | | || ||||| | |||| |||| || Sbjct 11433 TGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATATTTGATC 11492 Query 53580 TTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCT-G 53635 || ||| ||| || |||||| || || |||| || |||||||| | |||| | | Sbjct 11493 TTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGTTTTTAG 11549 Query 53636 ACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATTGTCCATCT 53686 || ||||| | ||| |||| |||| | || ||||| ||| Sbjct 11550 TCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTTGTC-ATCA 11608 Query 53687 ATTACAA-ACATGTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCA 53743 || ||| | ||| |||||||| | || | ||||||||| ||| || | || Sbjct 11609 CTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCCTCAGGT 11668 Query 53744 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 53803 | ||||| | || ||| ||| | ||| | | ||||| || ||||||||| Sbjct 11669 GATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAATTTTGT 11728 Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 |||||| || |||||||| ||||||||||| | ||||| || |||||||||||| | Sbjct 11729 TGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTTTCAGTT 11788 Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTT 53923 || | ||||| |||| | ||| | | || || ||| | || ||| | Sbjct 11789 TGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCTCTACCT 11848 Query 53924 TCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCA 53983 |||||||| ||| ||||| ||| || || || || || | |||| ||| ||| Sbjct 11849 TCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTCAAACCA 11908 Query 53984 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 54043 || |||| || | | || | ||| ||| | | | || |||| || |||||| Sbjct 11909 GGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAAT 11968 Query 54044 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 54103 | |||||||||||| | ||| |||| |||||| | |||| ||| || || || Sbjct 11969 AAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTGG 12028 Query 54104 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGT- 54162 || || | | ||| | || | | |||||| |||||||| || || | ||||| || Sbjct 12029 TTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTC--AATATATAGTG 12086 Query 54163 CATA-ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 54221 || | | ||||| | ||| || || || || || | || || || ||||||||| | | Sbjct 12087 CAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGA 12146 Query 54222 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 54281 | || | |||||||||||| |||||||||| |||||| || |||| ||||| ||| Sbjct 12147 CCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAG 12206 Query 54282 TGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGC 54341 | | | ||||||| || || || || || || || |||| || || || || | Sbjct 12207 TTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCAC 12266 Query 54342 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 54401 || ||| || ||||||||||| || || || ||| ||| |||| || || |||| Sbjct 12267 ATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAAC 12326 Query 54402 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 54461 | ||||||||| | | ||| |||| ||| || | || |||||||| || || | Sbjct 12327 ATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGA 12386 Query 54462 ACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAA 54521 | | | | || | | ||| || || || ||| | || || ||||| ||||| Sbjct 12387 AATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACCATGAA 12446 Query 54522 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 54581 | || || || || | ||||| | || || || ||||| | ||||| |||||| Sbjct 12447 TACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTTATTC 12506 Query 54582 TCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 54641 | | | || |||| || ||||| |||||||||||||| || ||||||| | Sbjct 12507 TTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTCTCTAT 12566 Query 54642 CGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATAC 54701 | ||| ||| | | | | ||| | || ||| | || | ||| || Sbjct 12567 CATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGTCTCCT 12626 Query 54702 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCA 54761 ||||||| || |||| | |||| ||||||||||||| | ||| || ||| | || | Sbjct 12627 TTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGATTAA 12686 Query 54762 TCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGG 54821 |||||| ||| || |||||| || |||| ||||| | || | |||||| | Sbjct 12687 CAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTAGCAG 12746 Query 54822 CTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGCTGTCA 54878 | | | |||||||| ||||| | | ||| || || || || |||| || | | Sbjct 12747 CCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGCAGCTA 12803 Query 54879 GAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912 | | || ||||| || ||||| || |||| ||| Sbjct 12804 AATTATCTAATTCGACAGTTGTAACACCATCATA 12837 >seq122 Length=40810 Score = 333 bits (368), Expect = 3e-86 Identities = 610/885 (69%), Gaps = 14/885 (2%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| || || | ||||||||||| || |||||||| | | || || || Sbjct 14477 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 14536 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 ||||| || ||| ||||||| ||||| | || | ||| | | || ||| || | Sbjct 14537 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 14596 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023 | ||||||||| |||||||| | ||| ||||| || |||||| || | | Sbjct 14597 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 14656 Query 24024 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 || || || || || |||| ||| | ||||| ||||||| || || || || || || Sbjct 14657 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 14715 Query 24083 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 24142 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 14716 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 14775 Query 24143 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 24202 |||| |||| ||| || ||||||| ||| | |||||||| ||||| | || ||||| Sbjct 14776 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 14835 Query 24203 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 24262 | || | |||||| | ||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct 14836 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 14895 Query 24263 TACTGCCGCAAAGGCAATAAGTCTTTCTCCATA-ACCGGCGCTGTCATGT---ATCCACT 24318 || || ||||| || | | || ||| || | | || || | || | ||||| | Sbjct 14896 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTT-ATCTGCAATCCATT 14954 Query 24319 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 24378 || ||||| |||||||| | || | ||| || ||||| || || ||||| || | Sbjct 14955 TTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 15014 Query 24379 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 24438 | | |||| || |||||| | || ||||||||||| | | ||| ||||||||| Sbjct 15015 ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAAT 15074 Query 24439 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 24498 |||||||||| || ||||| || || ||||||||| ||||||| | ||| || || | Sbjct 15075 GAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACAT 15134 Query 24499 --CTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556 || | ||| || || ||||||||||||| ||||| || ||| || ||||| || Sbjct 15135 CACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAA 15192 Query 24557 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATT 24613 ||| | || | || || || |||| | | | | | || |||||||||| Sbjct 15193 CGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATG 15252 Query 24614 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 24673 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || || Sbjct 15253 CAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTA 15312 Query 24674 CATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 ||| | ||| || || ||||| | |||||||| | |||||| || Sbjct 15313 CATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 15357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593716635003120