Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq572 98.7 8e-16 seq509 93.3 4e-14 >seq572 Length=74374 Score = 98.7 bits (108), Expect = 8e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || |||||||| ||||| ||||| | | ||| | || || | || || || Sbjct 55643 GTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCT 55702 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | |||||||| || ||||| || | |||||||| || ||||||||| || Sbjct 55703 GCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTG 55762 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | || ||| | |||||||||||| |||||||| || Sbjct 55763 ACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTC 55822 Query 21159 TTGACAAATATTTGCATTTTGA 21180 |||||||| |||||||| |||| Sbjct 55823 TTGACAAAAATTTGCATCTTGA 55844 >seq509 Length=17948 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||| || |||||||||||||| ||||| | || ||| | || || | || || || Sbjct 1915 AGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACC 1974 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| | |||||||| || ||||| || | ||||||||||| ||| || || Sbjct 1975 TGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTT 2034 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | | ||| ||| ||| | ||| ||| | |||||| ||||| || ||||| || Sbjct 2035 GACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGT 2094 Query 21158 TTTGACAAATATTTGCATTTT 21178 ||| ||||| |||||||| || Sbjct 2095 TTTAACAAAAATTTGCATCTT 2115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422255757136004