Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq122 318 6e-82 >seq122 Length=40810 Score = 318 bits (352), Expect = 6e-82 Identities = 604/876 (69%), Gaps = 21/876 (2%) Strand=Plus/Plus Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987 ||||| ||||| || ||||| |||||||| | || || || || |||||||| || ||| Sbjct 14492 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 14551 Query 13988 GGATTTGTT--GACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAA 14045 |||||||| | | || || |||| |||||||||| | | | |||| |||||| |||| Sbjct 14552 GGATTTGTAACGTCGTATAC-CTTT-TCACAACCTAATGCAATCAGTAGTCTATCTGCAA 14609 Query 14046 TGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 14105 ||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| | Sbjct 14610 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 14669 Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165 | || || ||| ||||| ||| || || ||| | || || | | ||||| Sbjct 14670 CGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 14729 Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 14225 | || | || || | |||| ||| | ||||| |||||||| ||| | | Sbjct 14730 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 14789 Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 | |||||||||| ||| || ||||| || || || || ||||||||||| |||| |||| Sbjct 14790 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 14849 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | ||||| || || | || ||||| || || ||||| || || ||||| |||||||| | Sbjct 14850 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 14909 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405 | | || | ||| ||||| | || | ||| | | ||||||||| |||||||| | Sbjct 14910 CCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 14969 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC-CTTCTCTTTA 14464 |||| || ||| | ||||||||||| ||||| ||||| ||| ||| |||| Sbjct 14970 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 15029 Query 14465 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATA 14524 | ||| ||||| |||||||| | ||| ||| |||| || || ||||||||||| Sbjct 15030 GATCTT-TGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 15088 Query 14525 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC---TGAGTAAAAT 14581 || || || ||||| |||||| |||| |||| ||| || || |||| |||| Sbjct 15089 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAG--AAAT 15146 Query 14582 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14641 | || | ||||||||||| |||||||||||| ||| ||||| || || | | || Sbjct 15147 -TCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTT 15205 Query 14642 TTAATAAAGTATTGCTCTTCATT---GCTGAGT---TTTTTCCAATCGGCTAAATCCTTA 14695 ||| ||| || || |||||| | | | | || |||||||| ||||| || Sbjct 15206 GAAATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTG 15262 Query 14696 GAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCAT 14755 || ||||| | ||| || | ||||| ||| || | || || || |||||| ||| Sbjct 15263 GAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAA 15322 Query 14756 ATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14791 ||||| | ||| || ||||| | ||||| ||| Sbjct 15323 ATTTCGTGATACTTGATTGGAAAGAGAACAAACCTT 15358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482341566384920