Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq122 214 2e-50
seq546 136 4e-27
seq572 95.1 1e-14
seq509 87.8 2e-12
>seq122
Length=40810
Score = 214 bits (236), Expect = 2e-50
Identities = 610/925 (66%), Gaps = 31/925 (3%)
Strand=Plus/Minus
Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566
|| ||||||||||| | || || | || ||||| | ||||| || | ||||
Sbjct 15387 GAAGAACCACTTTTAAAGGAAAACAAGAGAAGGTTTGTTCTCTTTCCAATCAAGTATCAC 15328
Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626
|| |||||| | |||||||| |||||||||||||| || ||||| | || ||| | ||
Sbjct 15327 GAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTCTGGACTGCGGAGGAAATTGAT 15268
Query 57627 CTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATT 57683
|| || || ||| || |||||| || | || ||| ||| ||| || |||
Sbjct 15267 CTCTCCAAAGATTTGCATGATTGGAACAATAGATTGAACGAAAATGAAAGATTCTTCATT 15208
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
| || | ||||| || || || || |||||||| || || || ||||| || |
Sbjct 15207 TCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTG-- 15150
Query 57744 AGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801
||| |||| ||| || || ||| | | ||||| | ||| || || || || ||| |
Sbjct 15149 AGAATTTCTCAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTA 15090
Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-- 57859
|| |||||| | ||||| |||| ||||| || | || ||||| ||| | || ||
Sbjct 15089 TGATGGAAAACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATC 15030
Query 57860 CAACGACGAGAAACGTAGAC-TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGA 57918
||| | || || | | | | ||||| || || |||||||| || ||| | |
Sbjct 15029 CAA--AGGA-AAGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAA 14973
Query 57919 AGGCAGAGTGGTCAATCAAATGGAT-----AAAAAGCGCCACGGCCACGTTCGCCGAGAG 57973
|||| || ||| | | |||||||| | |||| || ||| || |||||
Sbjct 14972 AGGCCGAATGGGCCTTAAAATGGATTGCAGATAAAG-----ATGCGTTGTTTGCAGAGAG 14918
Query 57974 GCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATT 58033
| | | || || || || || |||||||| ||||| || || ||||| | || ||
Sbjct 14917 GTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTT 14858
Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093
||| |||| || | || ||||||| || ||||||| ||||||| |||| | |
Sbjct 14857 CTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAG 14798
Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC 58153
|| || ||| | ||||| |||||||| || | | | | ||||||| | | |||
Sbjct 14797 AGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCT--TTTCACATTTGAACCATACC 14740
Query 58154 GACGCGGGATCGCATCTTGGAC--ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTT 58211
| | | | | ||| || || ||||| || || | || ||||| | |
Sbjct 14739 CCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAAATAC 14680
Query 58212 GTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTAC 58271
|||| || |||||||| || | ||||||||||||| || |||||||||| ||||
Sbjct 14679 TTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTAT 14620
Query 58272 ATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT-GATTG-GAGAGCGTCATTACAACA 58329
| ||||||||||| || ||||| || | | | | | ||| || | || ||| ||
Sbjct 14619 GTCGAGTTTGTTGCAGATAGACTACTGATTGCATTAGGTTGTGAAAAGGT--ATACGACG 14562
Query 58330 CGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCG 58389
| |||||| || || |||||| | || || || | || || |||||||||||||
Sbjct 14561 TTACAAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCG 14502
Query 58390 aaaaaaaaGTTAGCGAATATCAAAA 58414
|||| | ||| ||| || |||||
Sbjct 14501 AAAAGAGAGTCTCCGACTACCAAAA 14477
>seq546
Length=22432
Score = 136 bits (150), Expect = 4e-27
Identities = 402/620 (65%), Gaps = 0/620 (0%)
Strand=Plus/Plus
Query 23339 TTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCG 23398
|| ||||| | | |||||| | ||| || ||||||| ||| ||| | || | ||
Sbjct 11948 TTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCT 12007
Query 23399 CGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGC 23458
| | || ||||| ||| ||| || | | ||| | ||| || | | || | ||||
Sbjct 12008 CTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGC 12067
Query 23459 CACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAA 23518
|| ||||| | || | |||||||| || ||||| ||||| || || || || || ||
Sbjct 12068 CAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATAC 12127
Query 23519 CGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG 23578
| || ||||| || | || || | ||| || | | || ||||| | ||
Sbjct 12128 CTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTA 12187
Query 23579 CCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCC 23638
|| || | | ||||| ||| || || || || | || || || || || || |
Sbjct 12188 CCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCA 12247
Query 23639 GATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCT 23698
| ||| || |||| || |||| ||||| ||| || ||||| || || ||| || ||
Sbjct 12248 GTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCC 12307
Query 23699 TTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGT 23758
|| | || || |||||||| ||||||||||| | | || ||| | | ||| ||
Sbjct 12308 TTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGA 12367
Query 23759 GTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCA 23818
|| || || || || || || | || ||||| | ||| || || || || | | |
Sbjct 12368 GTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAA 12427
Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878
||||| || || || || ||||| | ||| || | ||| || | | ||| || || |||
Sbjct 12428 TCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCG 12487
Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938
| | || || ||| | || ||||| | || | ||||| || |||||||||
Sbjct 12488 GCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAG 12547
Query 23939 TCATAGTTAAAGTCACGATC 23958
| ||| || ||||| | |||
Sbjct 12548 TTATAATTGAAGTCTCTATC 12567
>seq572
Length=74374
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || ||||| | || || || || || ||| | || |||||| |
Sbjct 55842 AAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCT 55783
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | ||||| || | || || |||||||| | || || |||
Sbjct 55782 TCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGAC 55723
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | || || || || || || || || ||||| || ||| | ||| ||
Sbjct 55722 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTAC 55663
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| ||||| ||||| || ||||| |||| | ||| |||| || ||||
Sbjct 55662 AACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTA 55611
>seq509
Length=17948
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || || ||| | || || || || || ||| | || || || |
Sbjct 2115 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 2056
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | |||| | ||||| | ||| ||||||||||| | || || |||
Sbjct 2055 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 1996
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | || || || || || || || || ||||| || ||| || || ||
Sbjct 1995 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 1936
Query 31370 AACATTCAAAAAGAATCGACTCTTCA 31395
||||||||||| ||||| ||||||||
Sbjct 1935 AACATTCAAAAGGAATCTACTCTTCA 1910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445762672278480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |