Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq546 453 1e-122 seq122 306 5e-78 >seq546 Length=22432 Score = 453 bits (502), Expect = 1e-122 Identities = 1443/2217 (65%), Gaps = 38/2217 (2%) Strand=Plus/Plus Query 62039 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 62098 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 10711 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 10770 Query 62099 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 62158 || | || |||| || || |||||||| ||||| ||| | |||| Sbjct 10771 CTTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 10830 Query 62159 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62218 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 10831 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 10890 Query 62219 TTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62277 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 10891 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 10949 Query 62278 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCT 62334 |||| || | || |||||||| || ||| |||| || || || || || Sbjct 10950 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 11009 Query 62335 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGA 62394 ||||||||| | | | || |||| |||| | | || |||||||| | |||| Sbjct 11010 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTAACAATCTGGA 11069 Query 62395 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCAT 62454 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 11070 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 11129 Query 62455 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62514 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 11130 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 11189 Query 62515 TAAGACCGTATGTTCTGATTTTATCTTTTAGATGT-TCCCAATTCCAAAGATCCGACGGT 62573 | | ||| | | ||||||| || |||| ||| ||||| | | | | | || Sbjct 11190 TCAAACCATTGGCCTTGATTTTCTCCTTTA-ATGAATCCCAGTCATATAAGTTGGTTGGC 11248 Query 62574 ACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 62633 | | | ||||| | ||| | || |||||| || | || Sbjct 11249 TTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGTC 11308 Query 62634 TCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATG 62693 ||||||||||| ||| | | || || | ||| ||||| || ||| | | ||||||| Sbjct 11309 TCATATGGTCCATCCCTAATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAATG 11368 Query 62694 GTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT-AA 62752 |||||||| || | |||| || || | |||||| || ||||||||| |||| | || Sbjct 11369 GTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCAA 11427 Query 62753 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62812 | || || || || || || ||||| ||||||| | | || ||||| | |||| |||| Sbjct 11428 CATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATATT 11487 Query 62813 AGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62869 || || ||| ||| || |||||| || || |||| || |||||||| | || Sbjct 11488 TGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGTT 11544 Query 62870 TCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGCC 62919 | | | || ||||| | ||| |||| |||| | || || || Sbjct 11545 TTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTTG 11602 Query 62920 -CATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCA 62975 |||| || ||| | ||| |||||||||| || | |||||| || ||| || Sbjct 11603 TCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCC 11662 Query 62976 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 63035 | || | ||||| | || ||| ||| | ||| | | |||||| || ||| Sbjct 11663 TCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAA 11722 Query 63036 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63095 |||||||||||| || |||||||| ||||||||||| | ||||| || ||||||||| Sbjct 11723 TTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTT 11782 Query 63096 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 63155 ||| | |||| ||||| |||| | ||| | | | || || ||| | || | Sbjct 11783 TCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCT 11842 Query 63156 CTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 63215 || | ||||||||| ||| ||||| ||| || ||| || || || | |||| | Sbjct 11843 CTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTC 11902 Query 63216 AATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63275 || | ||| |||| || | | || | ||| ||| | | | || |||| || | Sbjct 11903 AAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCC 11962 Query 63276 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTT 63335 ||||| | |||||||||||| | ||| |||| |||||||| |||| ||| || || Sbjct 11963 ATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTA 12022 Query 63336 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63395 || || || | | ||| | || | | |||||| |||||||| || || | ||| Sbjct 12023 CCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATAT 12082 Query 63396 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63455 | || | | ||||| | ||| || || || || || | || || || ||||||||| Sbjct 12083 AGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTA 12142 Query 63456 TAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCT 63515 | || || | |||||||||||| || || ||| ||||||| ||||||| ||||| Sbjct 12143 AAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAA 12202 Query 63516 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63575 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 12203 CCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAA 12262 Query 63576 GCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGA 63635 || ||| ||| || || |||||||| ||||| ||| ||| || |||| || || Sbjct 12263 GCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAG 12322 Query 63636 AAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63695 ||||| ||||||||| | | | ||| |||| ||| || | || |||||||| || Sbjct 12323 AAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGT 12382 Query 63696 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 63755 || || | | | || | | ||| || || |||||| | || || ||||| | Sbjct 12383 GTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACCA 12442 Query 63756 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815 ||||| || || || || | ||||| | || || || ||||| |||| || ||| Sbjct 12443 TGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTT 12502 Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63875 ||| | || | || |||| || ||||| |||||||||||||| || |||||| Sbjct 12503 ATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTCT 12562 Query 63876 CGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTA 63935 | || ||| ||| | || | ||| | || ||| | || || ||| || Sbjct 12563 CTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGTC 12622 Query 63936 ATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 63995 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 12623 TCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGA 12682 Query 63996 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTG 64055 | | |||||| ||| || |||||| ||| |||| ||||| || || | ||| Sbjct 12683 TTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTA 12742 Query 64056 GCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGCT 64112 || || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 12743 GCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGCA 12799 Query 64113 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATA 64172 || | | | || ||||| || ||||| || |||| ||| | || ||||| |||| | Sbjct 12800 GCTAAATTATCTAATTCGACAGTTGTAACACCATCATAAACACCAGAAATAATCTTCTGA 12859 Query 64173 GCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTT-TCTAAT 64228 | ||| | ||||| | || | || ||| ||||| |||||| |||||| Sbjct 12860 GTAATTGCAGAAGGATGCACGTGTCTTGAGTCTAAACCATATGCCAATTTCTCTAAT 12916 >seq122 Length=40810 Score = 306 bits (338), Expect = 5e-78 Identities = 604/885 (68%), Gaps = 14/885 (2%) Strand=Plus/Plus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 14477 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 14536 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 ||||| || || || ||||| ||||| | ||| | |||| | | || ||| || | Sbjct 14537 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 14596 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | ||||||||| || || || | ||| ||||| || |||||| || | | Sbjct 14597 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 14656 Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 || || || || || |||| ||| | ||||| |||||| || || | || || || Sbjct 14657 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 14715 Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 14716 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 14775 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649 |||| || | ||| || ||||||| ||| | ||||| || ||||| | || ||||| Sbjct 14776 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 14835 Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709 | || | |||||| | ||| || ||||| || ||||| || || ||||| || ||||| Sbjct 14836 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 14895 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCTGTCATGT---ATCCACT 33765 || |||||||| || | | |||||| || | | || || | || | ||||| | Sbjct 14896 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTT-ATCTGCAATCCATT 14954 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 || ||||| |||||||| | || | ||| || || ||||| || ||||| || | Sbjct 14955 TTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 15014 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 | | |||| || |||||| | |||||||| ||||| | | ||| ||||||||| Sbjct 15015 ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAAT 15074 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 |||||||||| || || || || || ||||||||| ||||||| | ||| || || | Sbjct 15075 GAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACAT 15134 Query 33946 --CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAA 34003 || | ||| || || ||||||||||||| ||||| |||||| || ||||| || Sbjct 15135 CACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAA 15192 Query 34004 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATT 34060 ||| | || | || || || |||| | | | | | || |||||||||| Sbjct 15193 CGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATG 15252 Query 34061 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 34120 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || || Sbjct 15253 CAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTA 15312 Query 34121 CATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 ||| | ||| || || ||||| | |||||| || | |||||| || Sbjct 15313 CATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 15357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629812333150320