Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq546 430 2e-115 seq122 338 8e-88 seq221 89.7 7e-13 >seq546 Length=22432 Score = 430 bits (476), Expect = 2e-115 Identities = 1389/2139 (65%), Gaps = 39/2139 (2%) Strand=Plus/Plus Query 64832 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 64891 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 10711 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 10770 Query 64892 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 64951 || | || |||| || || |||||||| ||||| ||| | |||| Sbjct 10771 CTTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 10830 Query 64952 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 65011 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 10831 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 10890 Query 65012 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 65070 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 10891 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 10949 Query 65071 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 65127 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 10950 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 11009 Query 65128 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 65187 ||||||||| | | | || |||| |||| | | || || ||||| | || | Sbjct 11010 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTAACAATCTGGA 11069 Query 65188 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 65247 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 11070 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 11129 Query 65248 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 65307 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 11130 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 11189 Query 65308 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 65365 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 11190 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 11249 Query 65366 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 65425 | || ||||| | ||| | || |||||| || | || Sbjct 11250 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 11307 Query 65426 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 65485 || |||||||| ||| | | || |||| ||| ||||| || ||| | | |||||| Sbjct 11308 CTCATATGGTCCATCCCTAATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 11367 Query 65486 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT-A 65544 |||||| || || | |||| || || | |||||| | ||||||||| |||| | | Sbjct 11368 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 11426 Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604 | | || || || ||||| || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 11427 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 11486 Query 65605 TAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 65661 | || || ||| ||| || |||||| || || |||| || |||||||| | | Sbjct 11487 TTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 11543 Query 65662 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGC 65711 || | | || ||||| | ||| |||| |||| | || || || Sbjct 11544 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTT 11601 Query 65712 -TCATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTC 65767 ||||| || ||| | ||| |||||||||| || | ||||||||| ||| || Sbjct 11602 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 11661 Query 65768 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 65827 | || | ||||| | || ||| ||| | ||| | | ||||| || || Sbjct 11662 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 11721 Query 65828 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 65887 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 11722 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 11781 Query 65888 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 65947 |||| | |||| ||||| |||| | ||| | | | || || ||| | || Sbjct 11782 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 11841 Query 65948 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 66007 ||| ||||||||| ||| ||||| ||| || ||| || || || | |||| Sbjct 11842 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 11901 Query 66008 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 66067 ||| ||||| |||| || | | || | ||| ||| | | | || |||| || Sbjct 11902 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 11961 Query 66068 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTT 66127 |||||| | |||||||||||| | ||| ||||||||||| | |||| ||| || || Sbjct 11962 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 12021 Query 66128 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTA 66187 || || || | | ||| | || | | |||||| ||||||| || || | || Sbjct 12022 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 12081 Query 66188 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 66247 || || | | ||||| | ||| || || || || || | || || || |||||||| Sbjct 12082 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 12141 Query 66248 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 66307 | | || || | |||||||||||| ||||||||||||||||| || |||| ||||| Sbjct 12142 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 12201 Query 66308 TCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 66367 ||| ||| | ||||||| || || || || || || || |||| || || || Sbjct 12202 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 12261 Query 66368 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 66427 || ||| ||| || ||||||||||| || || || ||| ||| |||| || || Sbjct 12262 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 12321 Query 66428 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 66487 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 12322 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 12381 Query 66488 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 66547 || || | | | || | | ||| || || |||||| | || || ||||| Sbjct 12382 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 12441 Query 66548 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 66607 |||||| || || || || | ||||| | || || || ||||| | ||||| || Sbjct 12442 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATT 12501 Query 66608 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 66667 |||| | || | || |||| || ||||| |||||||||||||| || ||||| Sbjct 12502 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 12561 Query 66668 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 66727 || || ||| ||| | | | | ||| | || ||| | || | ||| || Sbjct 12562 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 12621 Query 66728 AATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATC 66787 ||||||| || |||| | |||| ||||||||||||| | ||| | ||| | Sbjct 12622 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 12681 Query 66788 CTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCT 66847 | | |||||| ||| || |||||| || |||| ||||| | || | ||| Sbjct 12682 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 12741 Query 66848 AGCGGCTATAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 66904 ||| || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 12742 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 12798 Query 66905 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 66943 || | | | || ||||| || ||||| || |||| ||| Sbjct 12799 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 12837 >seq122 Length=40810 Score = 338 bits (374), Expect = 8e-88 Identities = 609/884 (69%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| || || | ||||||||||| || |||||||| | | || || || Sbjct 14477 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 14536 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 ||||| || ||||||||||| |||| | || | |||| | | || ||| || | Sbjct 14537 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 14596 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046 | ||||||||| ||||| || | ||| ||||| || |||||| || | | Sbjct 14597 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 14656 Query 36047 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 || || || || || |||| ||| | ||||| ||||||| || || || || || || Sbjct 14657 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 14715 Query 36106 AGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 36165 | | || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 14716 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 14775 Query 36166 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 36225 |||| |||| ||| || ||||||| ||| | |||||||| ||||| | || ||||| Sbjct 14776 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 14835 Query 36226 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 36285 | || | |||||| | ||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct 14836 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 14895 Query 36286 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTT 36342 || || ||||| || | | |||||| || | ||| | || | ||||| || Sbjct 14896 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTT 14955 Query 36343 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 36402 | ||||| |||||||| | || | ||| || ||||| || || ||||| || | | Sbjct 14956 TAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 15015 Query 36403 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 36462 | |||| || |||||| | || ||||||||||| | | ||| |||||||||| Sbjct 15016 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 15075 Query 36463 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT- 36521 ||||||||| || ||||| || || ||||||||| ||||||| | ||| || || | Sbjct 15076 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 15135 Query 36522 -CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 36580 || | ||| || || ||||||||||||| ||||| || ||| || ||||| ||| Sbjct 15136 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 15193 Query 36581 GCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TTATTCCAATCATTG 36637 || | || | || || || |||| ||| | | | || |||||||||| Sbjct 15194 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 15253 Query 36638 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 36697 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || ||| Sbjct 15254 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 15313 Query 36698 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 36741 || | ||| || || ||||| | |||||||| | |||||| || Sbjct 15314 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 15357 >seq221 Length=25365 Score = 89.7 bits (98), Expect = 7e-13 Identities = 180/264 (68%), Gaps = 10/264 (4%) Strand=Plus/Plus Query 66068 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTT 66127 ||| || | ||| |||||||| ||||| |||||||||||||| | ||| ||| || || Sbjct 17825 CATGAACATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTT 17884 Query 66128 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTA 66187 || |||||| | | || ||| || | | || |||| |||||| || || || || Sbjct 17885 CCCATGATTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATA 17944 Query 66188 TATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 66245 |||| || || | || || | ||||||||| ||||| || | ||| || || | Sbjct 17945 TATG--CAAAATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAA 18002 Query 66246 TTATAAACTCTCAACATTGGAATAATACCATTGGATG---TACCATTGGTCCCGGAGATA 66302 || | ||| | ||||| || || | ||| ||||| | ||||| | ||| ||| Sbjct 18003 TTGAATACTTTTAACATAGGGATTAAACC---GGATGAAATCCCATTACTACCGTTGATG 18059 Query 66303 TAGCTTCCACTTGCACGAATATTA 66326 || | ||||| || | |||||| Sbjct 18060 TAAGTACCACTGGCTCTTATATTA 18083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658167296029960