Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq546 489 2e-133 seq122 318 8e-82 >seq546 Length=22432 Score = 489 bits (542), Expect = 2e-133 Identities = 1401/2139 (65%), Gaps = 39/2139 (2%) Strand=Plus/Plus Query 78711 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 78770 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 10711 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 10770 Query 78771 TTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 78830 || | || |||| || ||||||||||| ||||| ||| | |||| Sbjct 10771 CTTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 10830 Query 78831 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 78890 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 10831 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 10890 Query 78891 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 78949 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 10891 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 10949 Query 78950 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 79006 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 10950 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 11009 Query 79007 CTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 79066 |||||||| | | | || |||| |||| | | || || ||||| | || | Sbjct 11010 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTAACAATCTGGA 11069 Query 79067 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCAT 79126 |||| || | || ||||| | || ||||||||| || || ||||| | |||| | Sbjct 11070 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 11129 Query 79127 TATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTC 79186 | | || | |||||||| ||||| || || ||||| ||||| || | || ||||| Sbjct 11130 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 11189 Query 79187 TAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGG-- 79244 | | ||| | | ||||||| || |||| || ||||| || | || || || Sbjct 11190 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTC----ATATAAGTTGGTT 11245 Query 79245 GACAACATTCC--AAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 | | | | || |||||||| | ||||| | ||| | || |||||| | Sbjct 11246 GGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAA 11305 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 || ||||| ||||| ||| | || ||||||| ||| ||||| || || | | |||| Sbjct 11306 GTCTCATATGGTCCATCCCTAATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAA 11365 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 |||||||| ||||| | |||| || || | ||||||| | ||||||||| |||| | Sbjct 11366 ATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCT 11424 Query 79423 -AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 79481 || | || || || ||||| || ||||| ||||||| | | || ||||| | |||| | Sbjct 11425 CAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCAT 11484 Query 79482 ATTAGAAATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 79538 ||| || || ||| ||| || |||||| || || |||| || |||||||| | Sbjct 11485 ATTTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAA 11541 Query 79539 ATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC------- 79591 || | | || || | || | || || ||| | | | | | Sbjct 11542 GTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTT 11601 Query 79592 --CATCTATTACAA-ACATGTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTC 79646 |||| || ||| | ||| ||| || ||| || | ||||||||| ||| || Sbjct 11602 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 11661 Query 79647 ATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAA 79706 | || | ||||| | |||||| ||| | || | | || || || || Sbjct 11662 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 11721 Query 79707 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGT 79766 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 11722 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 11781 Query 79767 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTA 79826 |||| | |||| ||||| |||| | ||| | | | || || ||| | | || Sbjct 11782 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 11841 Query 79827 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTC 79886 ||| ||||||||| |||| ||||||||| || ||| || || || | ||||| Sbjct 11842 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 11901 Query 79887 TAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTT 79946 || ||||| ||| ||| | | || | ||| ||| ||| | || |||| || Sbjct 11902 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 11961 Query 79947 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 80006 |||||| | |||||||||||| | ||| |||| |||||| | |||| || || || Sbjct 11962 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 12021 Query 80007 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 80066 || || || | | ||| | || | | |||||| |||||||| || || | || Sbjct 12022 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 12081 Query 80067 TATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 80126 || || | | || |||| ||| || || || || || | || || || |||||||| Sbjct 12082 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 12141 Query 80127 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 80186 | | || || | |||||||||||| ||||||||||||||||| || |||| ||||| Sbjct 12142 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 12201 Query 80187 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 12202 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 12261 Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306 || ||| ||| || ||||||||||| || || ||| ||| || |||| || || Sbjct 12262 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 12321 Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 12322 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 12381 Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 80426 || || | | | |||| | ||| || || |||||| | || || ||||| Sbjct 12382 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 12441 Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATT 80486 |||||| || || || || | ||||| | || || || ||||| | ||||| ||| Sbjct 12442 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATT 12501 Query 80487 TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 80546 |||| | || | ||| |||| || ||||| |||||||||||||| || ||||| Sbjct 12502 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 12561 Query 80547 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 80606 || || ||| ||| | | | | ||| | || ||| | || | ||| || Sbjct 12562 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 12621 Query 80607 GATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 80666 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 12622 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 12681 Query 80667 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 80726 | | |||||| ||| || |||||| ||| |||| ||||| | || | ||| Sbjct 12682 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 12741 Query 80727 GGCGGCTAAAATGGCATAATCTGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 80783 || || || | |||||||||||||| | | ||| || || || || |||| || Sbjct 12742 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 12798 Query 80784 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822 || | | | || ||||| || ||||| || |||| ||| Sbjct 12799 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 12837 >seq122 Length=40810 Score = 318 bits (352), Expect = 8e-82 Identities = 607/887 (68%), Gaps = 18/887 (2%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 14477 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 14536 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||| || || || ||||| ||||| | || | |||| | | || ||| || | Sbjct 14537 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 14596 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | |||||| || ||||| || | ||| ||||| || |||||| || | | Sbjct 14597 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 14656 Query 49849 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 || || || || || |||| ||| | ||||| |||||| || || || || || || Sbjct 14657 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 14715 Query 49908 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 49967 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 14716 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 14775 Query 49968 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 50027 |||| || | ||| || ||||||| ||| || |||||||| ||||| | || ||||| Sbjct 14776 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 14835 Query 50028 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTC 50087 | || | |||||| | ||| || ||||| |||||||| ||||| ||||| || ||||| Sbjct 14836 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 14895 Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGT---ATCCACTT 50144 || || ||||| || || | |||||| || | || | || | ||||| || Sbjct 14896 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTT 14955 Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204 | ||||| |||||||| | || | ||| || || ||||| || ||||| || | | Sbjct 14956 TAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 15015 Query 50205 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 50264 | |||| || |||||| | |||||||| ||||| | | ||| |||||||||| Sbjct 15016 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 15075 Query 50265 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT- 50323 ||||||||| || || || || || ||||||||| ||||||| | ||| || || | Sbjct 15076 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 15135 Query 50324 -CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 50382 || | ||| || ||| ||||||||||||| ||||| || ||| || ||||| ||| Sbjct 15136 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 15193 Query 50383 GC--CAATACATGTTTTATAAAATGT----TTTTCGTTGGGTGTTAGTTTATTCCAATCA 50436 || || | || | | ||| | |||||||| | | || ||||||||| Sbjct 15194 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCT---ATTGTTCCAATCA 15250 Query 50437 TTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 50496 | | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || Sbjct 15251 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTG 15310 Query 50497 TACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 ||||| | ||| || || ||||| | |||||| || | |||||| || Sbjct 15311 TACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 15357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718262793477160