Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq122 320 2e-82
>seq122
Length=40810
Score = 320 bits (354), Expect = 2e-82
Identities = 603/874 (69%), Gaps = 17/874 (2%)
Strand=Plus/Plus
Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443
||||| ||||| |||||||| |||||||| | || || || || |||||||| ||||||
Sbjct 14492 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 14551
Query 13444 GGATTTGTT--GACATAAACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAA 13501
|||||||| | | || || |||| |||||||||| | | | | || |||||| ||||
Sbjct 14552 GGATTTGTAACGTCGTATAC-CTTT-TCACAACCTAATGCAATCAGTAGTCTATCTGCAA 14609
Query 13502 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13561
|||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| |
Sbjct 14610 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 14669
Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621
| ||| || ||| ||||| ||| || || ||| | || || | | ||| |
Sbjct 14670 CGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 14729
Query 13622 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13681
| || | || || | |||| ||| | ||||| |||||||| ||| | |
Sbjct 14730 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 14789
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
| |||||||||| ||| || ||||| || || || || ||||||||||| |||| ||||
Sbjct 14790 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 14849
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
| ||||| || || | || ||||| || || ||||| || || ||||| |||||||| |
Sbjct 14850 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 14909
Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861
| | | | ||| ||||| | || | ||| | || ||||||||| |||||||| |
Sbjct 14910 CCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 14969
Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTC-CTTCTCTTTA 13920
|||| || ||| | |||||||| |||||||||||||| ||| ||| ||||
Sbjct 14970 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 15029
Query 13921 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATA 13980
| ||| ||||| |||||||| | ||| ||| |||| || || |||||||| ||
Sbjct 15030 GATCTT-TGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 15088
Query 13981 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC-CGAGTAAAATCT 14039
|| || || ||||| |||||| |||| |||| ||| || || | | |||| |
Sbjct 15089 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAAT-T 15147
Query 14040 TTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTT 14099
|| | || |||||||| || ||||||||| ||| ||||| || || | | ||
Sbjct 15148 CTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGA 15207
Query 14100 AATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAATCGGCTAAATCCTTAGA 14153
||| ||| || || |||||| ||| | | || |||||||| ||||| || ||
Sbjct 15208 AATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGA 15264
Query 14154 AAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14213
||||| | ||| || | ||||| ||| || | || || || |||||| ||| ||
Sbjct 15265 GAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAAT 15324
Query 14214 TTCTTTATATAATATAGGAAAAACTACAAATCTT 14247
||| | ||| || ||||| | ||||| |||
Sbjct 15325 TTCGTGATACTTGATTGGAAAGAGAACAAACCTT 15358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478584797801160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |