Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq546 423 3e-113 seq122 280 2e-70 >seq546 Length=22432 Score = 423 bits (468), Expect = 3e-113 Identities = 1307/2013 (65%), Gaps = 41/2013 (2%) Strand=Plus/Plus Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 || || ||||| || || ||||| | | | || || || || |||||||| | || Sbjct 10838 TGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCATATCGATA 10897 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAG 71039 || |||||||| | || ||||| | ||| ||||| || || ||| || |||| |||| Sbjct 10898 ATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTTGAGGAAT 10956 Query 71040 GTTTG-TA--TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096 || | || |||||||| || ||| ||||| || || ||||| || ||||| Sbjct 10957 ATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAGAATCATT 11016 Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156 ||| | | | || |||| |||| | | || ||| ||||| | || ||||| || Sbjct 11017 CCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTAACAATCTGGAATTCACC 11076 Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216 | || ||||| | || ||||||||| || || ||||| | | || || | || Sbjct 11077 GGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGTTGTAACC 11136 Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC---CAATAGACTATTTCTAAG 71273 | |||||||| ||||| ||||||||||| ||||| || |||| || |||||| | Sbjct 11137 TAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAAT-GA--ATTTCTCAA 11193 Query 71274 ACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGG--TACA 71331 ||||| | |||||| || |||| || ||||| | | | | | ||| | Sbjct 11194 ACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCTTCTT 11253 Query 71332 ACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCG 71391 || | || | || |||||| || | || || Sbjct 11254 ACCCCAAAGATCAAACTGTAGGAGA--CCTTGGGATGCAGGAGATCCTTCAAAAGTCTCA 11311 Query 71392 TATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTT 71451 |||||||| || | || || |||| ||| ||||| || || ||| |||||||||| Sbjct 11312 TATGGTCCATCCCTAATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAATGGTT 11371 Query 71452 TCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT-AAGAG 71510 || ||||| | |||| || || | |||||| || ||||||||| |||| | || | Sbjct 11372 TCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCAACAT 11430 Query 71511 AATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGA 71570 || || || ||||| || ||||| || |||| | | || ||||||| |||| |||| || Sbjct 11431 CATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATATTTGA 11490 Query 71571 AATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 71627 || ||| ||| || |||||| || || |||| || |||||||| | ||| | Sbjct 11491 TCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGTTTTT 11547 Query 71628 GACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC---------CATC 71678 | || || | || | || || ||| | | | | | |||| Sbjct 11548 AGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTTGTCATC 11607 Query 71679 TATT---ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 71735 || ||||| | ||| |||||| || | ||||||||| ||| || | || Sbjct 11608 ACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCCTCAGG 11667 Query 71736 ATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 71795 | ||||| | ||||||| ||| | ||| | | ||||| || |||||||| Sbjct 11668 TGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAATTTTG 11727 Query 71796 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAAT 71855 ||||||| || |||||||| ||||||||||| | || || || |||||||||||| | Sbjct 11728 TTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTTTCAGT 11787 Query 71856 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT 71915 |||| ||||| |||| | ||| | | | || || ||| | || || ||| Sbjct 11788 TTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCTCTACC 11847 Query 71916 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCC 71975 ||||||||| |||| ||||||||| || ||| || || || | ||| || || Sbjct 11848 TTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTCAAACC 11907 Query 71976 AGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAA 72035 ||| |||| | || | | || | ||| ||| ||| | | |||| || |||||| Sbjct 11908 AGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAA 11967 Query 72036 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 72095 | |||||||||||| | ||| |||| |||||| | |||| || || || || Sbjct 11968 TAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTG 12027 Query 72096 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 72155 || || | | ||| | || | | |||||| |||||||| || || | |||| || Sbjct 12028 GTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGC 12087 Query 72156 CATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 72215 | | || || | ||| || || || || || | || || || ||||||||| | || Sbjct 12088 AAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGAC 12147 Query 72216 TCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACT 72275 || | |||||||||||| |||||||||| |||||| || |||| ||||| ||| | Sbjct 12148 CCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGT 12207 Query 72276 GGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 72335 | | |||||| || || || || || || || |||| || || || || || Sbjct 12208 TGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACA 12267 Query 72336 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 72395 | ||| || ||||||||||| || || || ||| ||| |||| || || ||||| Sbjct 12268 TTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACA 12327 Query 72396 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 72455 ||||||||| | | ||| |||| ||| || | || |||||||| || || || Sbjct 12328 TGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAA 12387 Query 72456 CCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTAT 72515 | | | |||| | ||| || || |||||| | || || ||||| ||| || Sbjct 12388 ATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACCATGAAT 12447 Query 72516 TCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 72575 || || || || | ||||| | ||| || || ||||| | ||||| ||||||| | Sbjct 12448 ACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTTATTCT 12507 Query 72576 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 72635 || | || |||| || ||||| |||||||||||||| || ||||||| || Sbjct 12508 TAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTCTCTATC 12567 Query 72636 GTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT 72695 ||| ||| | || | | ||| | || ||| | || || ||| || | Sbjct 12568 ATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGTCTCCTT 12627 Query 72696 TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCAT 72755 |||||| || |||| | |||| ||||||||||||| || ||| | ||| | | | Sbjct 12628 TGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGATTAAC 12687 Query 72756 CACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGC 72815 |||||| ||| || |||||| ||| |||| ||||| | || | ||| || || Sbjct 12688 AACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTAGCAGC 12747 Query 72816 TAGAATGGCATAATCTGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCTGCTGCCAG 72872 | | |||||||||||||| | | ||| || || || || |||| || || | Sbjct 12748 CAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGCAGCTAA 12804 Query 72873 AGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905 | | || ||||| || ||||| || |||| ||| Sbjct 12805 ATTATCTAATTCGACAGTTGTAACACCATCATA 12837 >seq122 Length=40810 Score = 280 bits (310), Expect = 2e-70 Identities = 596/884 (67%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || || | ||||||||||| || || || || | | || || || Sbjct 14477 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 14536 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || ||||| ||||| | || | |||| | | || ||| || | Sbjct 14537 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 14596 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | ||||||||| | || || | ||| ||||| || |||||| || | | Sbjct 14597 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 14656 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 || || || || || |||| ||| | ||||| ||||||| || || || || || || Sbjct 14657 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 14715 Query 42013 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 42072 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 14716 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 14775 Query 42073 ATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 42132 |||| || | ||| |||||||||| ||| | |||||||| ||||| | || ||||| Sbjct 14776 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 14835 Query 42133 TAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTC 42192 | || | |||||| | ||| || || || |||||||| ||||| ||||| || ||||| Sbjct 14836 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 14895 Query 42193 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTT 42249 || || ||||| || | | |||||| || | ||| | || | ||||| || Sbjct 14896 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTT 14955 Query 42250 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309 | ||||| |||||||| | || | ||| || || ||||| || ||||| || | | Sbjct 14956 TAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 15015 Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369 | |||| || |||||| | || ||||| ||||| | | ||| |||| ||||| Sbjct 15016 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 15075 Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTT- 42428 ||||||||| || || || || || ||||||||| | ||||| | || || || | Sbjct 15076 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 15135 Query 42429 -CTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAAC 42487 || | ||| || ||| |||||||||| || ||||| || ||| || ||||| ||| Sbjct 15136 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 15193 Query 42488 GCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTATTCCAATCATTG 42544 || | || | || || || |||| | | ||| || |||||||||| Sbjct 15194 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 15253 Query 42545 ATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATAC 42604 | |||||| || | ||| | ||| || | ||||| || |||||||||||||| || ||| Sbjct 15254 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 15313 Query 42605 ATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 || | ||| || || ||||| | ||||| || | |||||| || Sbjct 15314 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 15357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671133587598440