Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq509 96.9 3e-15 seq572 91.5 1e-13 >seq509 Length=17948 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| || || || || | ||| | ||||| ||||||||||| ||||| || | | Sbjct 1886 CCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAC 1945 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | || || | || ||||| ||| | |||||||| || || || || Sbjct 1946 AAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGA 2005 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || ||||| ||||| || || | | ||| ||| || | ||| | Sbjct 2006 ATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACT 2065 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTTA 19045 || | |||||| || ||||| ||||||||||| |||||||||||||| ||| Sbjct 2066 TCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 2116 >seq572 Length=74374 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || || |||| ||| | ||||| |||||||| || ||||| || | Sbjct 55613 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGAT 55672 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | || || | || ||||| ||| | |||||||| || || || || Sbjct 55673 AAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGA 55732 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || || || || || || || || | | ||| || || || || | Sbjct 55733 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACT 55792 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || | ||||||||| ||||| ||||| || ||||||||||||||||| || Sbjct 55793 TCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCATCTT 55842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414569419806586