Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq122 325 3e-84
>seq122
Length=40810
Score = 325 bits (360), Expect = 3e-84
Identities = 614/892 (69%), Gaps = 21/892 (2%)
Strand=Plus/Plus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || ||| ||||| ||||| |||||||||||||| || | | ||||| ||
Sbjct 14477 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 14536
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTAT---TTTTTACACCCTAATTCTAGT 12976
|||||||| ||||| |||||| | ||| | |||| |||| ||| |||||| | |
Sbjct 14537 TCCATAAAGTCGAATGGATTTGT--AACG-TCGTATACCTTTTCACAACCTAATGCAATC 14593
Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036
| | ||| || ||||||||||| | ||||| ||| ||||| ||||| || |
Sbjct 14594 AGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGC 14653
Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096
|| || ||||| | || || || || | || ||||| |||||||| |||||| |||
Sbjct 14654 AAGTTGACAGGTAGGGCGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATG 14713
Query 13097 ATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATGCA 13156
|| | ||| | | || || ||| | || | ||| ||| | || ||| |||
Sbjct 14714 ATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCA 14773
Query 13157 AAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGC 13216
||||| || || ||||||||||||| || |||||||| || || || | ||| |||
Sbjct 14774 AAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGC 14833
Query 13217 ATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCT 13276
|| | |||| ||||| | ||| || || | ||||| ||||| || || || || |||
Sbjct 14834 ATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCT 14893
Query 13277 TCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCT-CTATCCA 13335
||||| || ||||| || | |||||| || || || || |||| ||| | |||||
Sbjct 14894 TCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTA-TCTGCAATCCA 14952
Query 13336 CTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAA 13395
||| |||||| | || |||| || | || || |||| ||||| || |||||
Sbjct 14953 TTTTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAA 15012
Query 13396 ATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGA 13455
| | ||||||| ||| || |||||||| |||||||| ||| |||| ||
Sbjct 15013 GAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGA 15072
Query 13456 ATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAAC 13515
|||||| ||||||||| |||||||| ||||| |||||| ||||||||| | |||||
Sbjct 15073 ATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAAC 15132
Query 13516 TTC---GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaa 13572
|| ||| |||| | || |||| ||||| || ||||| || ||| |||||||||
Sbjct 15133 ATCACTTGAG--AAAT-TCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAA 15189
Query 13573 aaaaGCAAGTATGTGCTT--AATAAAttttttttCGTTTTCTGACAA---CTTTAACCAA 13627
|| || || | ||| ||| || | |||| ||||| ||| || ||||
Sbjct 15190 GAACGCTAGAA--CTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAA 15247
Query 13628 TCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTC 13687
|| | |||||||| || | ||| | ||||| | ||||| ||||| || | ||||||
Sbjct 15248 TCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTC 15307
Query 13688 TTATACATCATCCATATATCCTTATAAACAATGGGAAACACAACGTATCTTC 13739
|| ||||| ||| || || | ||| || ||||| | ||| | ||||
Sbjct 15308 TTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCTTC 15359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430978886011938
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |