Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq196 131 2e-25 >seq196 Length=21318 Score = 131 bits (144), Expect = 2e-25 Identities = 386/592 (65%), Gaps = 20/592 (3%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| ||||| | || || ||||| |||||| || |||||||||| || Sbjct 12080 AAATTTGAAGATTTGGGAATTGGAGGTTTAGATAAAGAATTCACTGCTATTTTCAGAAGA 12021 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 |||||||| || ||| |||| | | || | ||| | ||| | || || Sbjct 12020 GCATTTGCATCAAGAATCTTTCCACCAGGTGTTATTGAGAAAATGGGCATGACGCACATC 11961 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 ||||| || ||| | | || || |||||| |||||||| || || ||| || || Sbjct 11960 AAAGGTATGTTACTCTACGGTCCCCCTGGTACTGGTAAAACCTTGATTGCTAGACAAATC 11901 Query 164578 GCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633 | | ||| | | ||| || || || |||||||| || || |||||| | ||| Sbjct 11900 GGT-AAGATGCTTAAT-GCAAAGGAACCA--AAAATTGTCAACGGACCTGAAATTTTGTC 11845 Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693 ||| ||||| ||| || |||| || || | || ||||| |||| || || || || Sbjct 11844 CAAGTATGTCGGTTCATCTGAAGAGAACATTCGTAATTTGTTCAAGGATGCAGAGGATGA 11785 Query 164694 ACAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGATGC 164753 | | |||||| ||| || | ||||| |||| | |||||||| | ||| | Sbjct 11784 ATACAAGAAAAAGGGTGATGCGTCTGCTCTACATATTATCATCTTTGATGAATTGGATTC 11725 Query 164754 TCTTTGCAAAAAACGTGGT---------GAT---AATATTATTCATGATGCAGTGGTTAA 164801 ||| |||| || | ||| ||| | | | || ||| || || || Sbjct 11724 CGTTTTCAAACAAAGAGGTTCAAGAGGCGATGGAACTGGTGTTGCGGATAATGTTGTCAA 11665 Query 164802 TCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTAT 164861 ||||||| | |||| || |||||||| || ||||||||||| || | | ||||| Sbjct 11664 TCAGTTGTTGGCTAAGATGGATGGTGTCGATCAATTAAATAATATATTGGTCATTGGTAT 11605 Query 164862 GACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGAA 164921 ||| || || ||||||||||| ||| || | |||||||| |||| || | | Sbjct 11604 GACTAATAGAAGAGATTTAATTGACAGTGCCCTACTGAGACCTGGTAGATTTGAGGTTCA 11545 Query 164922 AATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTT 164973 | | ||||| ||||| || ||||||| | | |||||||| ||| || Sbjct 11544 AGTTGAAATTCATTTACCTGATGAAGAAGGTAGATTGCAAATTTTGAAAATT 11493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595867017020400