Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq208 114 2e-21
seq493 107 3e-19
>seq208
Length=29593
Score = 114 bits (126), Expect = 2e-21
Identities = 178/253 (70%), Gaps = 1/253 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| || |||||||||||||||| || ||||||||||| || | | | ||| |
Sbjct 4827 AGATC-CTCAGAGATAACATCCAAGGTATTACCAAGCCAGCAATTAGAAGATTAGCTAGA 4769
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| |||||| | |||| | ||| | || ||||| || | | ||| | |||
Sbjct 4768 AGAGGTGGTGTCAAGAGAATCTCGGCTTTGATTTACGAAGAAGTTAGGGCAGTTCTTAAG 4709
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| ||||| | | ||| || ||||| || ||||| || ||||| || | |||
Sbjct 4708 ACTTTCCTTGAAAACGTCATTAGAGATGCAGTCACTTATACTGAACACGCAAAGAGAAAG 4649
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| |||||||| | ||| |||||||||| ||||| | ||||| | | ||||||||
Sbjct 4648 ACCGTCACCTCTTTAGATGTCGTCTATGCTTTGAAGAGACAAGGTAGAACCCTTTATGGT 4589
Query 16688 TTTGGAAGTTAAT 16700
||||| ||| ||
Sbjct 4588 TTTGGTGGTTGAT 4576
>seq493
Length=20023
Score = 107 bits (118), Expect = 3e-19
Identities = 175/251 (70%), Gaps = 1/251 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| ||| |||||||||||||||| || ||||||||||| ||| | | | ||| |
Sbjct 2668 AGATC-CTTAGAGATAACATCCAAGGTATTACCAAGCCAGCAATCAGAAGATTAGCTAGA 2610
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | | || | ||| | || ||||| | | | ||| | |||
Sbjct 2609 AGAGGTGGTGTTAAGAGAATTTCAGCTTTGATTTACGAAGAAGTCAGAGCCGTTCTTAAG 2550
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| |||||| | | |||||| || || || |||||||| ||||| || | |||
Sbjct 2549 ACCTTCCTTGAAAACGTTATTAGAGACGCAGTCACTTATACCGAACACGCAAAGAGAAAG 2490
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| || || || | ||| | |||||||||||||| | ||||| | | |||| |||
Sbjct 2489 ACCGTTACTTCTCTAGATGTTGTCTATGCATTGAAGAGACAAGGTAGAACCCTTTACGGT 2430
Query 16688 TTTGGAAGTTA 16698
||||| ||||
Sbjct 2429 TTTGGTGGTTA 2419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074588328617
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |