Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq122 257 2e-63 >seq122 Length=40810 Score = 257 bits (284), Expect = 2e-63 Identities = 601/900 (67%), Gaps = 17/900 (2%) Strand=Plus/Plus Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259 ||||| ||||||||||| ||||| || || | | || || |||||||| || ||| Sbjct 14492 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 14551 Query 21260 GGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTACA 21319 |||||| | | ||| || | |||||| | | | | || ||||||||| ||| Sbjct 14552 GGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGTAGTCTATCTGCAACA 14611 Query 21320 AATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGCT 21379 || || | ||| |||||||| || || ||||||||||| ||| || ||||| || || Sbjct 14612 AACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCG 14671 Query 21380 TTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGAT 21439 | || || | ||||| ||| |||||||| ||| || | | | | | | Sbjct 14672 TCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTT 14731 Query 21440 --GTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAAC 21497 || || |||| || || ||| ||| | |||||| |||||||| ||| |||| Sbjct 14732 TCGT-CT-GGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 14789 Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 ||||||| |||| || | || || || || || ||||| ||||| || |||||||||| Sbjct 14790 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 14849 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 | ||||| || || || ||||||| || || |||||||| || ||||| |||||||||| Sbjct 14850 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 14909 Query 21618 CAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTG 21677 | || || | || | | | |||||||| ||||||||| ||||||| | Sbjct 14910 CCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 14969 Query 21678 CCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtt-tttttCATC 21735 ||||||| || ||||| ||||| ||||| || || || |||| ||| |||| | Sbjct 14970 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA--ATTCACTTTCCTT 15027 Query 21736 TACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTAT 21795 | ||| | ||| | ||| |||| ||||| || ||||| || Sbjct 15028 TGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCAT 15087 Query 21796 CGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAAC--CTCGGAATAAAAT 21853 | || || || || || |||||| | ||||||| | |||||| | | | ||| | Sbjct 15088 CATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATT 15147 Query 21854 CGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTT 21913 | | | | || |||||||| ||||| |||||| || ||||| || || | | || Sbjct 15148 C--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTT 15205 Query 21914 TTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTAATAAATCTTTTGAT 21970 || || ||| ||| || || | ||| || |||||||| |||||||| || Sbjct 15206 GAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAG 15265 Query 21971 AAATCTACTTCTTCAGTTGTCCA-AAAGCTAGCAATAGCCTTTTTATACATAATCCAGAT 22029 | ||| | ||| || | ||||| |||| | || ||||| || ||||| ||| || Sbjct 15266 AGATCAATTTCCTCCGCAGTCCAGAAAGAT-GCTTCTGCCTTCTTGTACATTTGCCAAAT 15324 Query 22030 ATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGATTCAACTAAAAGTGGTTC 22089 || | ||| | |||||||| | |||||||| | || ||| |||||||||||| Sbjct 15325 TTCGTGATACTTGATTGGAAAGAGAACAAACCTTCTCTTGTTTTCCTTTAAAAGTGGTTC 15384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531896351979560