Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq546 423 2e-113 seq122 302 6e-77 >seq546 Length=22432 Score = 423 bits (468), Expect = 2e-113 Identities = 1399/2158 (65%), Gaps = 39/2158 (2%) Strand=Plus/Plus Query 61988 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 62047 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 10711 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 10770 Query 62048 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 62107 || | || |||| || || |||||||| ||||| ||| | |||| Sbjct 10771 CTTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 10830 Query 62108 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62167 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 10831 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 10890 Query 62168 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62226 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 10891 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 10949 Query 62227 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62283 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 10950 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 11009 Query 62284 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 62343 ||||||||| | | | || |||| |||| | | || || ||||| | || | Sbjct 11010 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTAACAATCTGGA 11069 Query 62344 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCAT 62403 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 11070 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 11129 Query 62404 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62463 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 11130 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 11189 Query 62464 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 62521 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 11190 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 11249 Query 62522 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62581 | || ||||| | ||| | || |||||| || | || Sbjct 11250 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 11307 Query 62582 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62641 || |||||||| ||| | | || |||| ||| ||||| || ||| | | |||||| Sbjct 11308 CTCATATGGTCCATCCCTAATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 11367 Query 62642 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT-A 62700 |||||| || || | |||| || || | |||||| | ||||||||| |||| | | Sbjct 11368 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 11426 Query 62701 AGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62760 | | || || || || || || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 11427 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 11486 Query 62761 TAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 62817 | || || ||| ||| || |||||| || || |||| || |||||||| | | Sbjct 11487 TTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 11543 Query 62818 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGC 62867 || | | || ||||| | ||| |||| |||| | || || || Sbjct 11544 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTT 11601 Query 62868 C-CATCTATTACAA-ACATGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTC 62923 |||| || ||| | ||| ||| |||||| || | ||||||||| ||| || Sbjct 11602 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 11661 Query 62924 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAA 62983 | || | ||||| | || ||| ||| | ||| | | |||||| || || Sbjct 11662 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 11721 Query 62984 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 63043 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 11722 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 11781 Query 63044 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 63103 |||| | |||| ||||| |||| | ||| | | | || || ||| | || Sbjct 11782 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 11841 Query 63104 TCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63163 ||| | ||||||||| ||| ||||| ||| || ||| || || || | |||| Sbjct 11842 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 11901 Query 63164 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63223 ||| ||||| |||| || | | || | ||| ||| | | | || |||| || Sbjct 11902 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 11961 Query 63224 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63283 |||||| | |||||||||||| | ||| |||| |||||| | |||| ||| || || Sbjct 11962 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 12021 Query 63284 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63343 || || || | | ||| | || | | |||||| |||||||| || || | || Sbjct 12022 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 12081 Query 63344 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63403 || || | | ||||| | ||| || || || || || | || || || |||||||| Sbjct 12082 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 12141 Query 63404 ATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCT 63463 | | || || | |||||||||||| || || ||| ||||||| ||||||| ||||| Sbjct 12142 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 12201 Query 63464 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63523 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 12202 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 12261 Query 63524 TGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAG 63583 || ||| ||| || || ||||||||||| || ||| ||| || |||| || || Sbjct 12262 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 12321 Query 63584 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63643 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 12322 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 12381 Query 63644 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 63703 || || | | | || | | ||| || || |||||| | || || ||||| Sbjct 12382 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 12441 Query 63704 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63763 |||||| || || || || | ||||| | || || || ||||| | ||||| || Sbjct 12442 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATT 12501 Query 63764 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63823 |||| | || | || |||| || ||||| |||||||||||||| || ||||| Sbjct 12502 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 12561 Query 63824 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 63883 || || ||| ||| | | | | ||| | || ||| | || || ||| || Sbjct 12562 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 12621 Query 63884 GATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63943 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 12622 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 12681 Query 63944 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 64003 | | |||||| ||| || |||||| ||| |||| ||||| | || | ||| Sbjct 12682 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 12741 Query 64004 GGCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 64060 || || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 12742 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 12798 Query 64061 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTC 64118 || | | | || ||||| || ||||| || |||| ||| | || ||||| |||| Sbjct 12799 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATAAACACCAGAAATAATCTTC 12856 >seq122 Length=40810 Score = 302 bits (334), Expect = 6e-77 Identities = 603/885 (68%), Gaps = 14/885 (2%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 14477 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 14536 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| || || || ||||| ||||| | || | |||| | | || ||| || | Sbjct 14537 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 14596 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | |||||| || || || || | ||| ||||| || |||||| || | | Sbjct 14597 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 14656 Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 || || || || || |||| ||| | ||||| |||||| || || || || || || Sbjct 14657 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 14715 Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 14716 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 14775 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 |||| || | ||| || ||||||| ||| || |||||||| ||||| | || ||||| Sbjct 14776 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 14835 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 | || | |||||| | ||| || ||||| || ||||| ||||| ||||| || ||||| Sbjct 14836 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 14895 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCTGTCATGT---ATCCACT 33487 || |||||||| || | | |||||| || | | || || | || | ||||| | Sbjct 14896 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTT-ATCTGCAATCCATT 14954 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 || ||||| |||||||| | || | ||| || || ||||| || ||||| || | Sbjct 14955 TTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 15014 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 | | |||| || |||||| | |||||||| ||||| | | ||| ||||||||| Sbjct 15015 ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAAT 15074 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667 |||||||||| || || || || || ||||||||| ||||||| | ||| || || | Sbjct 15075 GAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACAT 15134 Query 33668 --CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33725 || | ||| || || | ||||||||||| ||||| || ||| || ||||| || Sbjct 15135 CACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAA 15192 Query 33726 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATT 33782 ||| | || | || || || |||| | | | | | || |||||||||| Sbjct 15193 CGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATG 15252 Query 33783 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33842 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || || Sbjct 15253 CAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTA 15312 Query 33843 CATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 ||| | ||| || || | ||| | |||||| || | |||||| || Sbjct 15313 CATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 15357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622941990604040