Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq122 190 5e-43
seq546 174 4e-38
>seq122
Length=40810
Score = 190 bits (210), Expect = 5e-43
Identities = 497/749 (66%), Gaps = 22/749 (3%)
Strand=Plus/Minus
Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273
||||||| ||||||||| | | || |||||||| ||| ||| |||| |||||
Sbjct 15200 TTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTGAGAATTTCT 15141
Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333
|| ||| ||||| |||||||| | |||||||||||| | ||||| ||||| ||||
Sbjct 15140 CAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAA 15081
Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC 22393
| |||| ||||||| |||||| | || | | | | | ||||| | | |||
Sbjct 15080 ACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAA- 15022
Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGG 22452
| ||| ||||||| || ||| || || | || || ||| | ||||| || |||
Sbjct 15021 AGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGG 14962
Query 22453 GCGCTGAAATGGATGAACAATGAA----CGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508
|| | |||||||| || || |||| || || || | | | ||||||||
Sbjct 14961 GCCTTAAAATGGATTGCAGATAAAGATGCGTTGTTT-GCAGAGAGGTTGGTGGCATTTGC 14903
Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568
|| |||||||| |||||||| ||||| ||||| | ||||| ||| | ||||| |
Sbjct 14902 TGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAG 14843
Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628
| | ||||| ||| | ||||| || || ||| | ||| | ||||||| ||| | ||
Sbjct 14842 AGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACA 14783
Query 22629 TACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATG---A 22685
|||||||||||| ||| |||| | | ||| | | |||| ||| | | |
Sbjct 14782 TACCGATTTTGCTTGTTTGCTCTTT---TCACATTTGAACCATA---CCCCAGACGAAAA 14729
Query 22686 AACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGC 22745
|| ||| | || ||||| | || ||||| ||||| || | || ||
Sbjct 14728 AATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAAATACTTCACTGACGC 14669
Query 22746 GTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGT 22805
|||| || | | | ||||| ||| || | ||| || ||| | | |||||
Sbjct 14668 CCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTCGAGTTTGT 14609
Query 22806 TGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTT---AATCC 22862
||||||| | ||| | ||| || | |||| || |||| ||| ||| |||| |||||
Sbjct 14608 TGCAGATAGACTACTGATTGCATTAGGTTGTGAAAAG--GTAT-ACGACGTTACAAATCC 14552
Query 22863 ATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGT 22922
||| || | ||||| ||||| |||| || || || || || |||||||| |||||
Sbjct 14551 ATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGT 14492
Query 22923 TGGTGAATACCAAAAAGCAGGTGTTATGG 22951
|| |||||||| |||||||| ||||
Sbjct 14491 CTCCGACTACCAAAAGGCAGGTGTCATGG 14463
>seq546
Length=22432
Score = 174 bits (192), Expect = 4e-38
Identities = 722/1120 (64%), Gaps = 38/1120 (3%)
Strand=Plus/Minus
Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150
||| | |||||||||||||||||||| | |||| ||| | || | |||||||| ||
Sbjct 12843 GGTGTTTATGATGGTGTTACAACTGTCGAATTAGATAATTTAGCTGCTGAAACTGCTGCT 12784
Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210
||| |||| | | ||||| ||||| | | |||||||| | ||||| ||||
Sbjct 12783 TATATGACAACTATCCATCCAGATTATGCGGTATTGGCTGCTAGAGTTGCAATTTCAAAC 12724
Query 363211 CTTCATAAAATGACATCAAATAAGTTTTCCAGTGTCATGGATAGTCTGTATAACTATGTC 363270
| || || ||| | || || || || || | || || |||| ||| |
Sbjct 12723 TTACAAAAGCAAACAACTAAGAAATTCTCTGAAGTTGTTAATCAACTATATACTTATATT 12664
Query 363271 AATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCGT 363330
|| | || | ||||| | ||| | ||| | | || | | ||| | |||
Sbjct 12663 GATCCTAAAAATGGTAAACCTGCTCCAATGATTTCAAAGGAGACTTGGGAAATTGTCCAA 12604
Query 363331 TCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA-TAT 363389
|||||| | | || ||||| | || ||||||| | || || | ||| | |||
Sbjct 12603 AAAAATGCGAATATATTAGATGATGCAATTCATTATGATAGAGACTTCAATTATAACTAT 12544
Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449
||| || | || || | || | || || | | || |||||| | |||| ||
Sbjct 12543 TTT-GGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTGCCGA 12485
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
| | || || ||| | ||||| | ||||| ||||||| ||| | ||| ||||| |
Sbjct 12484 AAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTGATTC 12425
Query 363510 CGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAA 363565
| |||||||| ||||| | || ||| | || | ||||| || || | ||||
Sbjct 12424 TGTTATTGAAACTTATAATTTGATGTCAAAGAG---GTAT-TTCACACATGCTTCTCCAA 12369
Query 363566 CAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAA 363621
| | | |||| | || |||| | |||| | |||||||| || |||||| | |
Sbjct 12368 CTCTTTTCAATTCGGGTACTCCAAGAAATCAA---ATGTCTTCATG-TTTCTTAGTTGCA 12313
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||||||||||||||||| || ||||||| ||| || | || | |||||| | ||||||
Sbjct 12312 ATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTTCC 12253
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG----TTA 363737
|| | ||| || || ||||| || || || ||| || | | ||| | |||
Sbjct 12252 AAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATC----AACTGGTTCTTA 12197
Query 363738 CATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796
||| ||| || | || | | || |||||| | |||| ||| || | || ||| | |
Sbjct 12196 TATTGCCGGTACTAATGGTACA-TCCAATGGGATTATTCCAATGATTAGGGTCTTTAATA 12138
Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854
| ||||| ||||| || ||||| ||||| | |||| | || |||||||| | ||
Sbjct 12137 ACACTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACC--TGGTGCGTTTGCACTATA 12080
Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914
| | |||||| ||| | |||||| |||| ||| |||| || |||||||| || ||
Sbjct 12079 TATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAA 12020
Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974
||| ||| | | ||| | ||| | ||| ||| | ||| || |||| |||||| |
Sbjct 12019 AGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGA 11960
Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034
| || ||| | | | ||||| | |||| | ||| ||| || ||| |
Sbjct 11959 AAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAG 11900
Query 364035 CGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATG-AATCGGAGGGAAA 364091
||||||| ||||| || | | | ||||| ||| |||| || | ||| | |
Sbjct 11899 TGATGTATATGGTGATGAATTCAAAGAATTATATACCAAA--TATGAAAGAGAAGGTAGA 11842
Query 364092 GGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151
||| | | |||||| ||||| ||| |||||| | | ||| | || | || | |||
Sbjct 11841 GGC-AGGAGAACAATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGA 11783
Query 364152 GACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC 364191
|| || ||||| | ||||| || || ||| | || |||
Sbjct 11782 AACTGGTACACCTTTCATGTTATATAAGGATGCATGTAAC 11743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303342428223158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |