Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq122 190 5e-43 seq546 174 4e-38 >seq122 Length=40810 Score = 190 bits (210), Expect = 5e-43 Identities = 497/749 (66%), Gaps = 22/749 (3%) Strand=Plus/Minus Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273 ||||||| ||||||||| | | || |||||||| ||| ||| |||| ||||| Sbjct 15200 TTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTGAGAATTTCT 15141 Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333 || ||| ||||| |||||||| | |||||||||||| | ||||| ||||| |||| Sbjct 15140 CAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAA 15081 Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC 22393 | |||| ||||||| |||||| | || | | | | | ||||| | | ||| Sbjct 15080 ACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAA- 15022 Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGG 22452 | ||| ||||||| || ||| || || | || || ||| | ||||| || ||| Sbjct 15021 AGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGG 14962 Query 22453 GCGCTGAAATGGATGAACAATGAA----CGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508 || | |||||||| || || |||| || || || | | | |||||||| Sbjct 14961 GCCTTAAAATGGATTGCAGATAAAGATGCGTTGTTT-GCAGAGAGGTTGGTGGCATTTGC 14903 Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568 || |||||||| |||||||| ||||| ||||| | ||||| ||| | ||||| | Sbjct 14902 TGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAG 14843 Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628 | | ||||| ||| | ||||| || || ||| | ||| | ||||||| ||| | || Sbjct 14842 AGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACA 14783 Query 22629 TACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATG---A 22685 |||||||||||| ||| |||| | | ||| | | |||| ||| | | | Sbjct 14782 TACCGATTTTGCTTGTTTGCTCTTT---TCACATTTGAACCATA---CCCCAGACGAAAA 14729 Query 22686 AACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGC 22745 || ||| | || ||||| | || ||||| ||||| || | || || Sbjct 14728 AATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAAATACTTCACTGACGC 14669 Query 22746 GTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGT 22805 |||| || | | | ||||| ||| || | ||| || ||| | | ||||| Sbjct 14668 CCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTCGAGTTTGT 14609 Query 22806 TGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTT---AATCC 22862 ||||||| | ||| | ||| || | |||| || |||| ||| ||| |||| ||||| Sbjct 14608 TGCAGATAGACTACTGATTGCATTAGGTTGTGAAAAG--GTAT-ACGACGTTACAAATCC 14552 Query 22863 ATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGT 22922 ||| || | ||||| ||||| |||| || || || || || |||||||| ||||| Sbjct 14551 ATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGT 14492 Query 22923 TGGTGAATACCAAAAAGCAGGTGTTATGG 22951 || |||||||| |||||||| |||| Sbjct 14491 CTCCGACTACCAAAAGGCAGGTGTCATGG 14463 >seq546 Length=22432 Score = 174 bits (192), Expect = 4e-38 Identities = 722/1120 (64%), Gaps = 38/1120 (3%) Strand=Plus/Minus Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150 ||| | |||||||||||||||||||| | |||| ||| | || | |||||||| || Sbjct 12843 GGTGTTTATGATGGTGTTACAACTGTCGAATTAGATAATTTAGCTGCTGAAACTGCTGCT 12784 Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210 ||| |||| | | ||||| ||||| | | |||||||| | ||||| |||| Sbjct 12783 TATATGACAACTATCCATCCAGATTATGCGGTATTGGCTGCTAGAGTTGCAATTTCAAAC 12724 Query 363211 CTTCATAAAATGACATCAAATAAGTTTTCCAGTGTCATGGATAGTCTGTATAACTATGTC 363270 | || || ||| | || || || || || | || || |||| ||| | Sbjct 12723 TTACAAAAGCAAACAACTAAGAAATTCTCTGAAGTTGTTAATCAACTATATACTTATATT 12664 Query 363271 AATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCGT 363330 || | || | ||||| | ||| | ||| | | || | | ||| | ||| Sbjct 12663 GATCCTAAAAATGGTAAACCTGCTCCAATGATTTCAAAGGAGACTTGGGAAATTGTCCAA 12604 Query 363331 TCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA-TAT 363389 |||||| | | || ||||| | || ||||||| | || || | ||| | ||| Sbjct 12603 AAAAATGCGAATATATTAGATGATGCAATTCATTATGATAGAGACTTCAATTATAACTAT 12544 Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 ||| || | || || | || | || || | | || |||||| | |||| || Sbjct 12543 TTT-GGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTGCCGA 12485 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | | || || ||| | ||||| | ||||| ||||||| ||| | ||| ||||| | Sbjct 12484 AAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTGATTC 12425 Query 363510 CGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAA 363565 | |||||||| ||||| | || ||| | || | ||||| || || | |||| Sbjct 12424 TGTTATTGAAACTTATAATTTGATGTCAAAGAG---GTAT-TTCACACATGCTTCTCCAA 12369 Query 363566 CAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAA 363621 | | | |||| | || |||| | |||| | |||||||| || |||||| | | Sbjct 12368 CTCTTTTCAATTCGGGTACTCCAAGAAATCAA---ATGTCTTCATG-TTTCTTAGTTGCA 12313 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||||||||||||||| || ||||||| ||| || | || | |||||| | |||||| Sbjct 12312 ATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTTCC 12253 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG----TTA 363737 || | ||| || || ||||| || || || ||| || | | ||| | ||| Sbjct 12252 AAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATC----AACTGGTTCTTA 12197 Query 363738 CATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||| ||| || | || | | || |||||| | |||| ||| || | || ||| | | Sbjct 12196 TATTGCCGGTACTAATGGTACA-TCCAATGGGATTATTCCAATGATTAGGGTCTTTAATA 12138 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | ||||| ||||| || ||||| ||||| | |||| | || |||||||| | || Sbjct 12137 ACACTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACC--TGGTGCGTTTGCACTATA 12080 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 | | |||||| ||| | |||||| |||| ||| |||| || |||||||| || || Sbjct 12079 TATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAA 12020 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974 ||| ||| | | ||| | ||| | ||| ||| | ||| || |||| |||||| | Sbjct 12019 AGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGA 11960 Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034 | || ||| | | | ||||| | |||| | ||| ||| || ||| | Sbjct 11959 AAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAG 11900 Query 364035 CGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATG-AATCGGAGGGAAA 364091 ||||||| ||||| || | | | ||||| ||| |||| || | ||| | | Sbjct 11899 TGATGTATATGGTGATGAATTCAAAGAATTATATACCAAA--TATGAAAGAGAAGGTAGA 11842 Query 364092 GGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151 ||| | | |||||| ||||| ||| |||||| | | ||| | || | || | ||| Sbjct 11841 GGC-AGGAGAACAATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGA 11783 Query 364152 GACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC 364191 || || ||||| | ||||| || || ||| | || ||| Sbjct 11782 AACTGGTACACCTTTCATGTTATATAAGGATGCATGTAAC 11743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303342428223158