Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq546 412 4e-110 seq122 338 8e-88 >seq546 Length=22432 Score = 412 bits (456), Expect = 4e-110 Identities = 1385/2139 (65%), Gaps = 39/2139 (2%) Strand=Plus/Plus Query 61843 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 61902 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 10711 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 10770 Query 61903 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 61962 || | || |||| || || |||||||| ||||| ||| | |||| Sbjct 10771 CTTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 10830 Query 61963 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62022 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 10831 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 10890 Query 62023 TTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62081 | ||||| |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 10891 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 10949 Query 62082 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62138 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 10950 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 11009 Query 62139 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 62198 ||||||||| | | | || |||| |||| | | || || ||||| | || | Sbjct 11010 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTAACAATCTGGA 11069 Query 62199 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 62258 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 11070 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 11129 Query 62259 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62318 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 11130 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 11189 Query 62319 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 62376 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 11190 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 11249 Query 62377 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62436 | || ||||| | ||| | || |||||| || | || Sbjct 11250 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 11307 Query 62437 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62496 || |||||||| ||| | | || |||| ||| ||||| || ||| | | |||||| Sbjct 11308 CTCATATGGTCCATCCCTAATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 11367 Query 62497 GGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTT-A 62555 |||||| || || | |||| || || | ||||| | ||||||||| |||| | | Sbjct 11368 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 11426 Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615 | | || || || ||||| || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 11427 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 11486 Query 62616 TAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 62672 | || || ||| ||| || |||||| || || |||| || |||||||| | | Sbjct 11487 TTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 11543 Query 62673 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGC 62722 || | | || ||||| | ||| |||| |||| | || || || Sbjct 11544 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTT 11601 Query 62723 C-CATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTC 62778 |||| || ||| | ||| |||||||||| || | ||||||||| ||| || Sbjct 11602 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 11661 Query 62779 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 62838 | || | ||||| | || ||| ||| | ||| | | ||||| || || Sbjct 11662 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 11721 Query 62839 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 62898 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 11722 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 11781 Query 62899 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 62958 |||| | |||| ||||| |||| | ||| | | | || || ||| | || Sbjct 11782 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 11841 Query 62959 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018 ||| ||||||||| ||| ||||| ||| || ||| || || || | |||| Sbjct 11842 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 11901 Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078 || ||||| |||| || | | || | ||| ||| | | | || |||| || Sbjct 11902 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 11961 Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138 |||||| | |||||||||||| | ||| |||| |||||| | |||| ||| || || Sbjct 11962 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 12021 Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198 || || || | | ||| | || | | |||||| |||||||| || || | || Sbjct 12022 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 12081 Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258 || || | | ||||| | ||| || || || || || | || || || |||||||| Sbjct 12082 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 12141 Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318 | | || || | |||||||||||| ||||||||||||||||| || || | ||||| Sbjct 12142 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 12201 Query 63319 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63378 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 12202 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 12261 Query 63379 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 63438 || ||| ||| || ||||||||||| || || || ||| ||| |||| || || Sbjct 12262 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 12321 Query 63439 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63498 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 12322 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 12381 Query 63499 AGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 63558 || || | | | || | | ||| || || |||||| | || || ||||| Sbjct 12382 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 12441 Query 63559 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63618 |||||| || || || || | ||||| | || || || ||||| | ||||| || Sbjct 12442 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATT 12501 Query 63619 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63678 |||| | || | || |||| || ||||| |||||||||||||| || ||||| Sbjct 12502 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 12561 Query 63679 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 63738 || || ||| ||| | | | | ||| | || ||| | || | ||| || Sbjct 12562 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 12621 Query 63739 AATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATC 63798 ||||||| || ||| | |||| ||||||||||||| | ||| | ||| | Sbjct 12622 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 12681 Query 63799 CTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCT 63858 | | |||||| ||| || |||||| || |||| ||||| | || | ||| Sbjct 12682 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 12741 Query 63859 AGCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 63915 ||| || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 12742 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 12798 Query 63916 TGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954 || | | | || ||||| || ||||| ||||||| ||| Sbjct 12799 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 12837 >seq122 Length=40810 Score = 338 bits (374), Expect = 8e-88 Identities = 611/885 (69%), Gaps = 14/885 (2%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| || || | ||||||||||| || |||||||| | | || || || Sbjct 14477 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 14536 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||| || ||||||||||| ||||| | || | |||| | | || ||| || | Sbjct 14537 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 14596 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 | ||||||||| ||||| || | ||| ||||| || |||||| || | | Sbjct 14597 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 14656 Query 32550 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 || || || || || |||| ||| | ||||| ||||||| || || || || || || Sbjct 14657 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 14715 Query 32609 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 32668 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 14716 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 14775 Query 32669 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 32728 |||| |||| ||| || ||||||| ||| | |||||||| ||||| | || ||||| Sbjct 14776 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 14835 Query 32729 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 32788 | || | |||||| | ||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct 14836 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 14895 Query 32789 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGCTGTCATGT---ATCCACT 32844 || || ||||| || | | |||||| || | | || || | || | ||||| | Sbjct 14896 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTT-ATCTGCAATCCATT 14954 Query 32845 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 32904 || ||||| |||||||| | || | ||| || ||||| || || ||||| || | Sbjct 14955 TTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 15014 Query 32905 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 32964 | | |||| || |||||| | || ||||||||||| | | ||| ||||||||| Sbjct 15015 ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAAT 15074 Query 32965 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTT 33024 |||||||||| || ||||| || || ||||| ||| ||||||| | ||| || || | Sbjct 15075 GAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACAT 15134 Query 33025 --CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33082 || | ||| || || ||||||||||||| ||||| || ||| || ||||| || Sbjct 15135 CACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAA 15192 Query 33083 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATT 33139 ||| | || | || || || |||| | | | | | || |||||||||| Sbjct 15193 CGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATG 15252 Query 33140 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33199 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || || Sbjct 15253 CAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTA 15312 Query 33200 CATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244 ||| | ||| || || ||||| | |||||||| | |||||| || Sbjct 15313 CATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 15357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633626701252400