Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq509 159 3e-34
seq572 150 2e-31
>seq509
Length=17948
Score = 159 bits (176), Expect = 3e-34
Identities = 174/229 (76%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || ||||| || ||||| | || || | ||||| ||||| |||
Sbjct 2112 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 2053
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||||||||| || || ||| |||||| ||||| ||||| |||||||||||||
Sbjct 2052 GACACTATCGA--CAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACC 1995
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | |||| ||||| || || ||||||||||||| | | ||| || || ||||
Sbjct 1994 AACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACA 1935
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| |||||||| ||||| || || || ||||| | || ||||||| ||
Sbjct 1934 ACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 1886
>seq572
Length=74374
Score = 150 bits (166), Expect = 2e-31
Identities = 172/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| || |||||||| |||| || | ||||| || || |||
Sbjct 55839 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 55780
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || |||||||| ||| || || ||||| |||||||||||||
Sbjct 55779 GACACCATCGA--CAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACC 55722
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | |||| ||||| || || ||||||||||||| | | ||| | ||| ||||
Sbjct 55721 AACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACA 55662
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| ||||| || || || || || | || | ||||| ||
Sbjct 55661 ACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 55613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433324466887235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |