Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq122 325 4e-84
seq667 87.8 2e-12
seq237 82.4 9e-11
>seq122
Length=40810
Score = 325 bits (360), Expect = 4e-84
Identities = 548/778 (70%), Gaps = 35/778 (4%)
Strand=Plus/Plus
Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976
|| || |||||| || ||||| || | |||||| |||||||||| |||||| || ||
Sbjct 14593 CAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAG 14652
Query 92977 -AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCA 93035
||| | |||||||| ||||| || ||| | | || || || |||||||||| | |
Sbjct 14653 CAAGTTG-ACAGGTAGGGCGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAA 14711
Query 93036 AGATTTCTATTACTCTACTATTTGGT---GGTTTTTGTACGACATAATTGT----ACATT 93088
||||| | | || | | ||| || || | | || | || ||| | |
Sbjct 14712 TGATTTGTCTGACAAT--TTTTTCGTCTGGGGTATGGTTC-----AAATGTGAAAAGAGC 14764
Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148
|| || ||||| ||||||||||||||||| |||| | |||| ||| ||| ||| ||
Sbjct 14765 AAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTC 14824
Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208
|||||||| | || |||| || || | ||| || || || ||||| |||||| ||
Sbjct 14825 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAG 14884
Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CT 93267
|| |||||||| || || ||||||||||| | | || ||||| || ||| ||
Sbjct 14885 AAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTATCT 14944
Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
|| ||||||||||| ||||| ||||| |||| ||| ||||| || | |||||| || ||
Sbjct 14945 GCA-ATCCATTTTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGC 15003
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
|| |||| | | || | || | | |||| ||||| ||||| || || | ||||||
Sbjct 15004 ATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATA 15063
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
|||| ||||| | || ||||| ||||||||| || ||||||||| |||| || |
Sbjct 15064 AGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGG 15123
Query 93448 GATCTGCACTT--CTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGAT 93505
|| || || | ||||||||| |||| || | ||||||||||||||||||||| ||
Sbjct 15124 AATTTGAACATCACTTGAGAAA--TTCTCAACTAAATTTTCATTGACTATACCATCAGAA 15181
Query 93506 GCTGCaaaaaaaGCCAATATATGCTTTATAAAATG-----TTTCTCATCATC-TTTAAGC 93559
|| ||||| || || || | || | | ||||| | | |||| || || || |
Sbjct 15182 GCAGCAAAGAACGC---TAGA-ACTCT-TGAAATGAAGAATCTTTCATTTTCGTTCAATC 15236
Query 93560 --TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATG 93617
|| | |||||| | |||||| || ||||| | ||| || ||||||| || ||||
Sbjct 15237 TATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATG 15296
Query 93618 CTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675
||||||| || |||||||| | ||| || || ||||| | |||||||| | |||||
Sbjct 15297 CTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAA 15354
>seq667
Length=16792
Score = 87.8 bits (96), Expect = 2e-12
Identities = 82/102 (80%), Gaps = 3/102 (3%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| ||||||||||||||||||||| ||| || | | ||||| | |||| |||||||
Sbjct 16787 CAGCTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGTGGG 16728
Query 126328 TTCGAACCCCACACCTGACAAAT-TATTATTG--GAATTTTT 126366
||||||||||||| ||| ||||| | || ||| ||||| ||
Sbjct 16727 TTCGAACCCCACAGCTGTCAAATATTTTTTTGCTGAATTATT 16686
>seq237
Length=34901
Score = 82.4 bits (90), Expect = 9e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| ||||||||||||||||||||| ||| || | | ||||| | |||| |||||||
Sbjct 16702 CAGCTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGTGGG 16643
Query 126328 TTCGAACCCCACACCTGACA 126347
||||||||||||| ||| ||
Sbjct 16642 TTCGAACCCCACAGCTGTCA 16623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556856143251560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |