Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq546 181 1e-40 seq122 104 3e-17 >seq546 Length=22432 Score = 181 bits (200), Expect = 1e-40 Identities = 548/836 (66%), Gaps = 18/836 (2%) Strand=Plus/Plus Query 115561 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 115620 ||||| ||||| || ||||||| ||||| |||||| |||| | |||||| || | || Sbjct 10754 AGGTAATACATACCTGTCTTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 10813 Query 115621 TTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 115680 || | ||||||| ||| || || ||||||| ||| || ||||| | | | Sbjct 10814 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 10873 Query 115681 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAG 115740 || | ||| || |||||||| || | ||| | ||| ||||| ||||| | || Sbjct 10874 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 10933 Query 115741 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACC 115800 | || ||| || || | || |||| | | || || || || ||| | || Sbjct 10934 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 10993 Query 115801 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTCTTGAGATC-CTCCACGAG 115856 || | | |||||| || || |||||| || || | | ||| ||| || | Sbjct 10994 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-AT 11049 Query 115857 GTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCG 115915 | || |||| || ||||| || | | ||| ||| || || |||| | Sbjct 11050 ATAAGGGTTAACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 11108 Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975 |||| || |||||||| || |||| ||| | ||||| | ||| || || || ||||| | Sbjct 11109 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 11168 Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035 |||| | || | || | | ||| || | || ||||| | | |||| Sbjct 11169 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 11228 Query 116036 AGTCGTAGTTGAGCT--TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093 |||| || | || | ||| || | |||| | ||||||||| |||| ||||||||| Sbjct 11229 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 11286 Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 116151 || || ||||| ||||| ||||||||||| || || ||| | ||||| || Sbjct 11287 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATGGATAATTCAACACTT 11344 Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 116211 ||||| | || || ||||| || || |||||||| || ||||| | |||| || || Sbjct 11345 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 11404 Query 116212 TCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 116271 |||||||| | | | ||| || || |||| || | |||||||||||| | Sbjct 11405 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 11464 Query 116272 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 116331 ||||||| | | ||||||||| || ||| || || || || ||||| | || ||| Sbjct 11465 GCAATTGGTCTGTTTCTCATATTTGATCTTCTTGCAGTTTCAACAGGATAGTAGTTTCTA 11524 Query 116332 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 ||||| | |||| | ||||| || ||||||||||| |||||||| | ||| || Sbjct 11525 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTC 11580 >seq122 Length=40810 Score = 104 bits (114), Expect = 3e-17 Identities = 326/493 (66%), Gaps = 19/493 (4%) Strand=Plus/Plus Query 127553 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 127612 || || || || ||||| || ||||||||| | ||| | ||| ||||||||||| || Sbjct 14804 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 14863 Query 127613 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCTCG 127672 | |||||| ||||||||||| || || || ||| || || || | | | ||| Sbjct 14864 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 14923 Query 127673 GCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGAT 127731 ||||| | || |||| | | ||| ||| || | ||||| | ||||||| || ||| Sbjct 14924 GCAAA-CAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGGCCTTTTCCTTGAT 14982 Query 127732 ACATGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 127788 |||||||| || | || || || | |||| ||| |||| || |||||||||||| Sbjct 14983 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 15039 Query 127789 GTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTT-CATTATGGCACTGAT 127847 ||| |||| || | | ||||| ||||| || | ||| ||| || || Sbjct 15040 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 15098 Query 127848 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAAATTGTTATTGATAT 127907 || | |||||| | || || || || || ||| | ||||| | | | || Sbjct 15099 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 15158 Query 127908 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 127964 | ||| || || ||||| || ||||||| ||||| || | | | | | |||| Sbjct 15159 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 15218 Query 127965 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCT 128021 | |||||| ||||||| | ||||| || | | ||| || |||||||| | | Sbjct 15219 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 15275 Query 128022 CCTCCGCAGTCCA 128034 ||||||||||||| Sbjct 15276 CCTCCGCAGTCCA 15288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502069546040