Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq546 188 8e-43
>seq546
Length=22432
Score = 188 bits (208), Expect = 8e-43
Identities = 1154/1834 (63%), Gaps = 41/1834 (2%)
Strand=Plus/Plus
Query 109410 AAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAG 109469
||| ||||||||||| || |||| || |||||| | || | |||||| || | |
Sbjct 10753 AAGGTAATACATACCTGTCTTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAA 10812
Query 109470 TTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCG 109529
||| | ||| ||| | | || | | |||||| || || |||||||| | | ||
Sbjct 10813 TTTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGC 10872
Query 109530 ACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTA 109589
||| | |||||| ||||| ||||| || |||||| || |||||||||||||| ||
Sbjct 10873 ACCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATA 10932
Query 109590 CAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCAC 109649
|| | |||||| || | ||||| | | | ||| ||||| || ||| | | |
Sbjct 10933 TAAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGAT 10992
Query 109650 CATGAGATCCTTCAT---CTCTTTCGACCAGAGACCGACCTTTTTGAGATC-GTCAACAA 109705
|| | | ||||| || || |||||| || | | | ||| ||||| |
Sbjct 10993 GATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-A 11048
Query 109706 GATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCG 109765
|| ||| || | |||||||| || | | || ||| || || | |
Sbjct 11049 TATAAGGGTTAACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAG 11108
Query 109766 TGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGG 109825
|||| ||||| || || || |||| ||||| ||||| | || ||||| || ||||| |
Sbjct 11109 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 11168
Query 109826 GAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCC 109885
| || | || | |||| | ||| || | ||| | ||| | || ||||
Sbjct 11169 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 11228
Query 109886 AATCATAACGACCACTAAATT--TAGTCTCACCATCCCACATATCTGGTTGAAGTACACC 109943
| ||||| ||| || | | || | |||| | ||| || || | |||
Sbjct 11229 AGTCATA--------TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACC 11280
Query 109944 CTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCT--CGGCCAACTCG 110001
| | |||||||| || | ||| |||| || | || || ||| || || ||
Sbjct 11281 TTGGGATGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATGGATAATTCA 11338
Query 110002 GATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGA 110061
||||| | || |||||||| || || |||||||| ||| |||||
Sbjct 11339 ACACTTGCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTT 11398
Query 110062 GACTCTTCACAGTCGAAGGGAAGACCACAA-AGAATAAACACATCCGCTAGACCCTGAAC 110120
| ||| | || || || | | | ||| | || || |||| || | ||| || ||
Sbjct 11399 GCTTCTGGCGAATCAAATGGTA-ATCTCAACATCATGAAGGCATCTGCCAAACCTTGGAC 11457
Query 110121 ACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAA 110180
||| | | |||| || | | |||| || || | || |||||||| || || || |
Sbjct 11458 ACCAACAGCAATTGGTCTGTTTCTCATATTTGATCTTCTTGCAGTTTCAACAGGATAGTA 11517
Query 110181 GTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT 110240
||| | ||||||| ||| | || || |||||| ||| || |||||||| | ||
Sbjct 11518 GTTTCTATCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTT 11577
Query 110241 GTC---GTAAT-CGAAC-GTTTTCGTC-TCCTTATTGACATATTTGGGGAGAGCAATAGA 110294
|| || || | ||| ||| | ||| || | | ||| || || | |||| |
Sbjct 11578 CTCAAAGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACT 11637
Query 110295 CGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTG--TATTCCAAAATTTCCGTACAC 110352
|| | ||| || || | || || || | | || ||||| | |||||| ||
Sbjct 11638 AGCTAAATTACAAACTGCTGTTTC--CTCAGGTGATGAATATTCAACAATTTCACAGCAT 11695
Query 110353 AAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCC 110412
|| |||||| || || |||||||| || | ||||| ||||| ||| |||||||||
Sbjct 11696 AAATTGGAAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCC 11755
Query 110413 TTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACA 110472
||||| | |||| | || ||||||||||| || || | | | || | | |||||
Sbjct 11756 TTATATAACATGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAAC 11815
Query 110473 TCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCC 110532
| || | ||| | | |||||| || || ||||| || || ||
Sbjct 11816 TTTTGTGCTTTAATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCT 11875
Query 110533 TCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGAC 110592
| ||||| | || || |||||| | ||| || | || |||||| | |
Sbjct 11876 TTGAATTCATCACCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTC 11935
Query 110593 CAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAA 110652
|||| | || | |||||| || | ||| || | ||||||||||| | || | |||
Sbjct 11936 CAATCTTCATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAAT 11995
Query 110653 AGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATG 110712
| || | | | ||||| | ||| ||||| | | || | ||| || |
Sbjct 11996 AAATCTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGA 12055
Query 110713 ATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC----CTTACGACGACCCGC 110768
||||| || ||||| || || | ||| | || | | || ||| | ||| |
Sbjct 12056 ATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTT-TTATTACCACC 12114
Query 110769 CTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGA 110828
|||| |||||| | ||| ||| ||| |||||||| | ||| |||||||| |||| |||
Sbjct 12115 TTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGA 12174
Query 110829 TTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACC 110888
| |||||| ||||| ||| || | | | | ||| | || ||||| | ||
Sbjct 12175 TGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCC 12234
Query 110889 AATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATC 110948
||||||||| || || ||| ||||| ||| | | ||| |||| ||||| ||
Sbjct 12235 AATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTC 12294
Query 110949 AATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCC 111008
||| ||||| |||| | |||| || || || |||||||| ||| | || || ||
Sbjct 12295 AATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACC 12354
Query 111009 CGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATG 111067
|| |||||| || || || | ||||| |||| | |||| | |||||| || || |
Sbjct 12355 CGAATTGAAAAGAGTTGGAGAAGCATGTGTGAA-ATACCTCTTTGACATCAAATTATAAG 12413
Query 111068 TGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATAT 111127
| || | | || | ||| | ||| |||||||||| |||||||| ||| | | ||
Sbjct 12414 TTTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAAT 12473
Query 111128 ATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCT 111187
||| ||| ||||| | ||| |||| | | ||| |||||| | |||| || |
Sbjct 12474 GTTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTT 12533
Query 111188 TGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221
||| |||||| || | ||| ||| || | |||
Sbjct 12534 TGAAACCAAAATAGTTATAATTGAAGTCTCTATC 12567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588971074688200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |