Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq546 228 1e-54 >seq546 Length=22432 Score = 228 bits (252), Expect = 1e-54 Identities = 953/1479 (64%), Gaps = 45/1479 (3%) Strand=Plus/Plus Query 105925 TCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTT 105983 |||||| ||| || || || | ||||| |||||||||||||| || | ||| | |||| Sbjct 11086 TCTTCT-AGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTT 11144 Query 105984 GTGCGGTGGAGGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTTTC 106041 | | || || || || ||||||||||| | | || || | | | || || || | Sbjct 11145 GAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTCTCAAA--CCATTGGC 11202 Query 106042 CTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTT-CACCTT--CCCA 106098 |||||| ||||| | ||||||||| || | || |||||| | ||| |||| Sbjct 11203 CTTGATTTTCTCCTTTAATGAATCCCAGTCATA--TAAG-TTGGTTGGCTTCTTACCCCA 11259 Query 106099 CATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACC 106158 | |||||| || || | |||||||| | ||||| || ||||| |||||||| | || Sbjct 11260 AAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGTCTCATATGGTCC 11319 Query 106159 TTGGGCTTCA--GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAG 106216 | | | | | |||||| || ||||||| | || ||||| ||||||||||| Sbjct 11320 ATC--CCTAATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAATGGTTTCAAAA 11377 Query 106217 ATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAAT 106276 || || ||||| ||||| ||||| |||||||||| | | ||| || || Sbjct 11378 ATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGGTAATCTCAACATCATGAAG 11437 Query 106277 ACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGC 106336 |||| || | |||||| ||||| | | |||| ||||||| || |||||| || ||| Sbjct 11438 GCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATATTTGATCTTCTT 11497 Query 106337 GCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 106396 ||||| ||||| ||||| | ||||| || |||| | || | ||||| || |||| | Sbjct 11498 GCAGTTTCAACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGTTTTTAGTCACAACC 11557 Query 106397 TTTGTGATTTCATGAAGTTTTTCATA-----ATCAAAAGTGCGAGTC-TC---TTCATTG 106447 ||||| |||||||| | || ||| | | ||| ||| | ||| || |||| Sbjct 11558 TTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTTGTCATCACTTTCA--- 11614 Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 ||| | || | || | || ||||| ||||| || || || || || Sbjct 11615 ACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCCTCAGGTGATGAA 11674 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 || || | |||||| || || |||||| || || |||||||| | ||| ||| Sbjct 11675 TATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAATTTTGTTGATTA 11734 Query 106568 CTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGAC 106627 || ||||| || |||||||| || | |||| | || || || || || || || | Sbjct 11735 GATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTTTCAGTTTGAGCT 11794 Query 106628 TTGAGAATTGCCTTCCA-CACATCGGCGGCTGGTACAATGG--CGTTGGCCCGTCCCTCC 106684 | | || | | ||| || | | || | ||| | | ||| | ||| | Sbjct 11795 TCTAAGATCGAATACCATAACTTTTG----TGCTTTAATTGTTCTCCTGCCTCTACCTTC 11850 Query 106685 GC-CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743 | || || || || || | ||| || || ||||| | || | ||| || Sbjct 11851 TCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTCAAACCAGG 11910 Query 106744 TGCCTTGTCT-GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802 || ||| || || |||| | || ||| | || | |||||| | | ||| || | Sbjct 11911 TG-CTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAATA 11969 Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 106862 || |||||||| | | | || | |||||| | | ||||| | ||| |||| Sbjct 11970 AATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTGGT 12029 Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922 | | | |||| || || | ||||| | ||||| ||||||| ||| | ||| | Sbjct 12030 TTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAA 12089 Query 106923 TAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACG 106978 | || |||| | ||| |||| | ||||| | || ||| ||||| || Sbjct 12090 ACGCACCAGGTCTTT-TATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACC 12148 Query 106979 CGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTG 107038 | || |||||||||||| |||| ||| |||||| || || |||| ||| | | Sbjct 12149 CTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTT 12208 Query 107039 GCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACAC 107098 | ||| | || ||| || || | ||||||||| ||||| || || || ||||| Sbjct 12209 GATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACAT 12268 Query 107099 TCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAA 107158 || | | ||| |||||||||| | || || || ||||| | || | | ||| || Sbjct 12269 TCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACAT 12328 Query 107159 CTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAAC 107218 ||||| || |||||| ||||| | |||||| || ||||| | || || |||| Sbjct 12329 GAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAA- 12387 Query 107219 ATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGAT 107277 |||||| | |||||| | || || || | ||||||||||| || || || || || Sbjct 12388 ATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACCATGAAT 12447 Query 107278 GCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCG 107337 || | ||| || | ||| | | | |||||| |||| | | |||| | | Sbjct 12448 ACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTTATTCT 12507 Query 107338 TTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 | |||||| ||| | || | ||||||| |||||| || Sbjct 12508 TAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATA 12546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975866285560