Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq122 302 5e-77 >seq122 Length=40810 Score = 302 bits (334), Expect = 5e-77 Identities = 592/866 (68%), Gaps = 17/866 (2%) Strand=Plus/Plus Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966 |||||||||| ||||| || || | || || || || |||||||| || |||||||| | Sbjct 14499 TTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAATGGATTTG 14558 Query 36967 --ATGTATTATATATAGTACTACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTC 37024 | || |||| | | ||| |||| | |||| || ||||| |||||||| || Sbjct 14559 TAACGTCGTATACCTTTTC--ACAACCTAATGCAATCAGTAGTCTATCTGCAACAAACTC 14616 Query 37025 TATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-T 37083 | || | |||||| | || | || ||||| | | || || || | || || | Sbjct 14617 GACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCGTCAGT 14676 Query 37084 GAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATAT---TAACAATAACTTCTT 37140 |||| | | |||| | || || || || ||| || | | ||||| ||| | Sbjct 14677 GAAGTATTTCTTTT-CAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTTTCGT 14735 Query 37141 CAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTT 37200 | ||||| || || |||| | ||| | ||||| |||||||| ||||||||||| Sbjct 14736 C---TGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAACCTT 14792 Query 37201 CATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAA 37260 ||||||||| |||| || || || || || || |||||||| |||||||| ||||| | Sbjct 14793 CATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCA 14852 Query 37261 TCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTA 37320 ||| || || | |||||| || ||||| ||||||||||||||||| || |||||||| | Sbjct 14853 ACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCA 14912 Query 37321 CAAGACG-TGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCC 37379 | | | | | | | | | || || || | |||||||||| | ||| || ||| Sbjct 14913 CCAACCTCTCTGCAAACAACGCATCTTTA-TCTGCAATCCATTTTAAGGCCCATTCGGCC 14971 Query 37380 TTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTA 37439 ||| || | |||| |||||||||||||| || || | || | |||| | | Sbjct 14972 TTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTGGA 15031 Query 37440 TCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCT 37499 ||| | || ||||||||||| | |||| ||| |||| || ||||| ||||| || Sbjct 15032 TCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCATA 15091 Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTA 37559 || || || ||||| ||||| |||| || | | ||||||||| | | || ||| | Sbjct 15092 ATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCA 15151 Query 37560 GCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATA 37619 |||| |||||||| ||||| |||||| ||| |||||||| || ||||| | || Sbjct 15152 ACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATG 15211 Query 37620 AAATGTCTTTCA---TCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCA 37676 || ||||||| || || || || |||||||||| | |||||| || | |||| Sbjct 15212 AAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCA 15271 Query 37677 ACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTA 37736 | ||| || | ||||| ||| ||| ||| || ||||| |||||| || | | Sbjct 15272 ATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGA 15331 Query 37737 TGTTGTATTGGAAATATTACAAATCT 37762 | | |||||||| | ||||| || Sbjct 15332 TACTTGATTGGAAAGAGAACAAACCT 15357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592311846750760