Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq546 215 3e-51
seq221 170 1e-37
>seq546
Length=22432
Score = 215 bits (238), Expect = 3e-51
Identities = 362/517 (70%), Gaps = 14/517 (3%)
Strand=Plus/Plus
Query 25896 AGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACA 25955
|||| ||| |||||| |||||| ||||||| | |||||||||||||| |||||||| |
Sbjct 11925 AGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATA 11984
Query 25956 TTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTA 26015
||| ||||||||||| ||||| ||||||||||| ||||| || || | | ||| |
Sbjct 11985 AAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAA 12044
Query 26016 AGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTT 26075
||||||| ||||||||| ||||| || || | ||| | ||||| ||| |||||
Sbjct 12045 TAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTT 12104
Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135
| |||||||| || || || |||||||| | ||| || || | | |||||||| ||
Sbjct 12105 TATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAA-TA 12163
Query 26136 ATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGA 26194
|||| ||| | | || || || | ||| | || || || |||||||||| ||
Sbjct 12164 ATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGT 12223
Query 26195 GCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCG 26254
||| | || || |||||||| ||| ||||| ||||| ||| | |||||
Sbjct 12224 ATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCA 12283
Query 26255 AAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAA 26314
| || |||| ||| ||| | |||||| | | ||| ||||| ||||| | ||| |
Sbjct 12284 TAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTG---A 12340
Query 26315 TGAGTT---GTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATA--TCCTTCAC 26369
| || || || ||||| || | || || | |||||| || |||| || || ||
Sbjct 12341 TTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGAC 12400
Query 26370 -TCAAAGCTGTATAAGTTTCAAGAACTTCATCGATAT 26405
||||| |||||||||||| ||| ||| ||||
Sbjct 12401 ATCAAA---TTATAAGTTTCAATAACAGAATCAATAT 12434
>seq221
Length=25365
Score = 170 bits (188), Expect = 1e-37
Identities = 192/252 (76%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 25898 AATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATT 25957
|||||| |||||| ||| | || ||||||||||| || | |||||||||||| |
Sbjct 17790 AATAAACACCAATCTTCATCTCTTTCCACTTTCTCCATGAACATATCTGGAATCCATAGA 17849
Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017
||| |||||||||||| |||||||||||||| || || |||||||| | | || | ||
Sbjct 17850 GCAATAAATAAATCTCTAGCTCTCATTTCTTCCTTCCCATGATTCTTCCTGATAT-TGAG 17908
Query 26018 AAA-TCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-CTACCTTTTCTTT 26075
||| ||||||| ||| |||||||| |||||||| || |||||| |||| |||||
Sbjct 17909 AAAGTCAAAAACATCACCATGCCATGGCTCTAAATATAT-GCAAAATGCACCTGGTCTTT 17967
Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135
| |||||| || || || ||| ||||||| |||||| ||||| ||||| || | ||
Sbjct 17968 TGTTTCCACCCTGGTCAACATATTGTGCAGTTGAATTGAATACTTTTAACATAGGGATTA 18027
Query 26136 ATCCAGTTGAAA 26147
| || | |||||
Sbjct 18028 AACCGGATGAAA 18039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253037936854175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |