Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq546 253 2e-62 seq352 89.7 6e-13 >seq546 Length=22432 Score = 253 bits (280), Expect = 2e-62 Identities = 897/1379 (65%), Gaps = 37/1379 (3%) Strand=Plus/Minus Query 75242 GGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGG 75300 || || || || || || ||||||||||| | || || || | |||||| | ||| Sbjct 12450 GGTATTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGG 12391 Query 75301 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTC 75360 ||| |||| || || | ||||| || |||||| | ||||| |||||| || ||||| Sbjct 12390 TAT-TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTC 12332 Query 75361 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 75420 || ||| | | || | ||||| || || || | |||||||||| ||| | | Sbjct 12331 TTCATGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAA 12272 Query 75421 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 75480 || ||||| || || || ||||| ||||||||| | || || ||| || | || Sbjct 12271 AGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAG 12212 Query 75481 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 75540 | | | | ||| |||| || || |||||| ||| |||| |||||||||||| | Sbjct 12211 ATCAACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGAT 12152 Query 75541 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTC 75597 | | || ||||| ||| || | ||||| | |||| || | ||| ||| Sbjct 12151 TAGGGTCTTTAATAACACTGCAAGGTATGTTGACCAAGGTGGTAATAA-AAGACCTGGTG 12093 Query 75598 CATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGAC 75656 | | || | || | || || |||||| | ||||| | || || |||| | | Sbjct 12092 CGTTTGCACTATATATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGA 12033 Query 75657 TCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAG 75716 ||||| ||| | ||||| | | |||||| | || | | | |||||||| | Sbjct 12032 AAAACCACGGTAAAGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTG 11973 Query 75717 ACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAG 75775 | | || ||| | | |||||| | || | ||| || | |||| || || ||| Sbjct 11972 ATTTATTTATGGAAAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAG 11913 Query 75776 GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA 75835 |||| ||| | || | ||||| || || ||| | || || || |||||| Sbjct 11912 -CACCTGGTTTGAGTGATGTATATGGTGATGAATTCAAAGAATTATATACCAAATATGAA 11854 Query 75836 GAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAA 75894 || ||||||| || || | ||| | | ||| ||| | | || | | Sbjct 11853 AGAGAAGGTAGAGGCAGGAGAACAATTAAAGCA-CAAAAGTTATGGTATTCGATCTTAGA 11795 Query 75895 ATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAG 75954 | | || || || ||||| ||||| | ||| | || |||||||| ||||||||||| Sbjct 11794 AGCTCAAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATC 11735 Query 75955 TAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTA 76014 ||| ||| | |||||||| ||||| || ||| | ||| |||||| | || || Sbjct 11734 TAATCAACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATA 11675 Query 76015 CACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 || || || || || ||||| ||||| || | || | || | ||| Sbjct 11674 TTCATCACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGT 11615 Query 76075 CAATGAA---GA-GACTCGCACTTTTGAT-----TATGAAAAACTTCATGAAATCACAAA 76125 |||| || ||| | ||| ||| | | ||| || | |||||||| ||||| Sbjct 11614 ---TGAAAGTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAA 11558 Query 76126 GATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGC 76185 | |||| || ||||| | || | |||| || ||||| | ||||| ||||| ||||| Sbjct 11557 GGTTGTGACTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGC 11498 Query 76186 GCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGT 76245 ||| || |||||| || ||||||| |||| | | ||||| |||||| | || |||| Sbjct 11497 AAGAAGATCAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGC 11438 Query 76246 ATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTAT 76305 || || ||| | | |||||||||| ||||| ||||| ||||| || || Sbjct 11437 CTTCATGATGTTGAGATTACCATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAAT 11378 Query 76306 CTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC--TGAAGCCCAA 76363 ||||||||||| ||||| || | ||||||| ||| |||||| | | | | | Sbjct 11377 TTTTGAAACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCCATTAGG--GAT 11320 Query 76364 GGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATG 76423 || | |||||||| ||||| || ||||| || |||||||| | || ||||||||| | Sbjct 11319 GGACCATATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTT 11260 Query 76424 TGGG--AAGGTG-AAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAG 76480 |||| ||| | |||||| || | || ||||||||| | ||||| |||||| Sbjct 11259 TGGGGTAAGAAGCCAACCAA-CTTA--TATGACTGGGATTCATTAAAGGAGAAAATCAAG 11203 Query 76481 GAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCAC 76538 | || || || | | | || || | | ||||||||||| || || || || | | Sbjct 11202 GCCAATGG--TTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTC 11145 Query 76539 AAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGA 76597 |||| | ||| | || |||||||||||||| ||||| | || || ||| |||||| Sbjct 11144 AAATTCTAGGTTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCTAGAAGA 11086 >seq352 Length=45524 Score = 89.7 bits (98), Expect = 6e-13 Identities = 271/414 (65%), Gaps = 5/414 (1%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || || |||||||| ||||| || || | ||| || ||||| || || || | Sbjct 3114 GGCGCAAAGATCCCTCGAGGTGCTATTTTAAATGGTCCACCCGGTACAGGTAAAACGTTA 3055 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 || || ||||| || |||||| || || || ||| | | || |||| | | Sbjct 3054 CTTGCTAAAGCCACTGCTGGTGAAGCAGGGGTTCCGTTCTACTCTGTT-TCTGGTTCTGA 2996 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 |||||||| |||||||||||||| ||||| | | ||||| || | || | | || Sbjct 2995 ATTTGTGGAAATGTTTGTTGGTGTTGGTGCGTCACGTGTTCGTGAGTTGTTCAAGACTGC 2936 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAA--GCA- 175511 | |||||| ||||| |||||| ||| ||||||| || ||||| | || || || Sbjct 2935 AAGAGAAAATGCACCATCTATTGTTTTCGTTGATGAAATCGATGCTATCGGAAAATCCAG 2876 Query 175512 ACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACT 175571 | | | | | |||||| || ||||| || |||||| | || | ||||| || || Sbjct 2875 AGGAAAGGGAAGAGGTATGGGAGGTAATGATGAAAGAGAAAACACCTTAAATCAGCTTCT 2816 Query 175572 CACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCG 175631 ||| |||||||| ||| | ||| | |||| ||| |||| | |||||||| Sbjct 2815 AGTCGAAATGGATGGATTTAAGTCTGACGATCATGTTGTTGTTTTTGCAGGTACTAATCG 2756 Query 175632 CGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCGCAAGAT 175685 || || | | || || | || | |||||| | |||||||| || || Sbjct 2755 TGTTGACGTTTTGGACCCAGCTTTGCTAAGACCGGGTAGATTTGATCGTAAAAT 2702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596564611186720