Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq509 152 1e-31
seq122 150 4e-31
seq572 141 2e-28
>seq509
Length=17948
Score = 152 bits (168), Expect = 1e-31
Identities = 175/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
||||||||| | | || ||||| || | ||||| || ||| || || || || ||||
Sbjct 1885 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGA-ATGTTGTAGTCAG 1943
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || |||| |||| || ||||| ||||| |||||||| | ||| ||||| |||||||
Sbjct 1944 ACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTG 2003
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| || ||||| || ||||| |||||| || ||||| |||| || || || || |
Sbjct 2004 GAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGA 2063
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540
|||||| ||||| || ||||||||||| ||||||| ||| || ||||| |||
Sbjct 2064 CTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 2116
>seq122
Length=40810
Score = 150 bits (166), Expect = 4e-31
Identities = 472/731 (65%), Gaps = 16/731 (2%)
Strand=Plus/Plus
Query 49649 TAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAA 49708
|| |||||| || ||||| || ||||| || |||| || || ||||||||| | ||
Sbjct 14596 TAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAA 14655
Query 49709 TTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaatta 49767
|| | |||| || ||| | || | ||||||| | || || || |||| |||| |
Sbjct 14656 GTTGACAGGTAGGGCGTCAGTGAAGTATTTCTTTT-CAATATCAACGGCTTCGGTAATGA 14714
Query 49768 tcataattatattattttttgataatttatatttaatatgattcgcatatattaaACATG 49827
| | | | | |||| | ||| || | ||| | | | | ||||| |
Sbjct 14715 TTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGT---GAAAAGAGCAAACAAG 14771
Query 49828 CAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 49887
||||||| ||||||||||| || || ||| | || | || || || || || ||||
Sbjct 14772 CAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTG 14831
Query 49888 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 49947
|||| || ||||||||||| | ||| || || |||||||| || ||| ||||| ||||
Sbjct 14832 GCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATAC 14891
Query 49948 CCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATCC 50007
| || ||| |||||||| | | || || |||||| | | |||| ||||
Sbjct 14892 CTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCC 14951
Query 50008 AATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT- 50066
| |||| ||||| || || |||| |||||| | || || |||| || || || |||
Sbjct 14952 ATTTTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATA 15011
Query 50067 --AATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTT 50124
|||||| |||| | || ||||||||||| |||
Sbjct 15012 AGAATTCA---CTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTT 15068
Query 50125 CAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACT 50184
| ||||| | |||||| ||||| || ||| || | | || |||| | |
Sbjct 15069 CCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTT 15128
Query 50185 GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGA 50244
|||| || |||| ||||||||||| ||| || ||||||||||| || || |
Sbjct 15129 GAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAA 15188
Query 50245 AGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAA---ATT-TTCCCAA 50300
|||| |||| ||| | ||| || | ||||||| || || || ||| |||| |
Sbjct 15189 AGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAAT 15248
Query 50301 GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTT 50360
|| ||| ||| || || | ||| | ||| || ||||| || |||||| | | ||
Sbjct 15249 CATGCAA-ATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTC 15307
Query 50361 TTATACATTTG 50371
|| ||||||||
Sbjct 15308 TTGTACATTTG 15318
>seq572
Length=74374
Score = 141 bits (156), Expect = 2e-28
Identities = 176/241 (73%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||| ||||||||||| | | || || || || | |||| || || ||| |
Sbjct 55602 GTTCAATGATACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGT 55661
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || || ||||| |||| |||| || ||||| ||||| |||||||| | ||| ||||
Sbjct 55662 TGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTT 55721
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || ||||| |||||||| || || | || ||||| || | || |
Sbjct 55722 GGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAG 55781
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
| ||||| ||||||| |||||||| ||||| ||||| || || | ||| || ||||| |
Sbjct 55782 AAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCATCT 55841
Query 192539 T 192539
|
Sbjct 55842 T 55842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984471561468150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |