Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq122 174 3e-38 seq509 149 1e-30 seq572 132 9e-26 >seq122 Length=40810 Score = 174 bits (192), Expect = 3e-38 Identities = 367/542 (68%), Gaps = 9/542 (2%) Strand=Plus/Plus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 |||||||| || || ||| | |||||||||||||||||||| || | | || || Sbjct 14477 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 14536 Query 38892 TTCATAAAATCAAATGGATTTTTG--GTATTATAATATTTTTCTCCTATCAATACATATA 38949 | |||||| || ||||||||| | || |||| ||||| | ||| || | Sbjct 14537 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACC--TTTTCACAACCTAATGCAATCA 14594 Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009 || |||||| || ||||| || ||||| || |||| || || ||||||||| | | Sbjct 14595 GTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCA 14654 Query 39010 ATTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaatt 39068 | || | |||| || ||| | || | ||||||| | || || || |||| |||| Sbjct 14655 AGTTGACAGGTAGGGCGTCAGTGAAGTATTTCTTTT-CAATATCAACGGCTTCGGTAATG 14713 Query 39069 atcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACAT 39128 || | | | | |||| | ||| || | ||| | | | || ||||| Sbjct 14714 ATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGT---GAAAAGAGCAAACAA 14770 Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188 |||||||| |||||||||||||| || ||| | || | || || || || || ||| Sbjct 14771 GCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCT 14830 Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 39248 ||||| || ||||||||||| | ||| || || |||||||| || ||| ||||| ||| Sbjct 14831 GGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATA 14890 Query 39249 CCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATC 39308 || || ||| |||||||| | | || || |||||| | | |||| |||| Sbjct 14891 CCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATC 14950 Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368 || |||| |||||| || || |||| |||||| | || || |||| || || || ||| Sbjct 14951 CATTTTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAAT 15010 Query 39369 AA 39370 || Sbjct 15011 AA 15012 >seq509 Length=17948 Score = 149 bits (164), Expect = 1e-30 Identities = 177/240 (74%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| | || || ||||| || | ||||| || || ||| || Sbjct 1877 TTCTTACCACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTG 1936 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || || |||| || | || || ||||| ||||| ||||| || | ||| |||||| Sbjct 1937 TAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGG 1996 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || ||||| || ||||| |||||| || ||||| ||||| || || Sbjct 1997 TCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGAT 2056 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTA 172073 || || ||||||| ||||| || ||||||||||| ||||||| || || ||||| ||| Sbjct 2057 GACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 2116 >seq572 Length=74374 Score = 132 bits (146), Expect = 9e-26 Identities = 171/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || || || || | |||| || || || || || Sbjct 55607 ATGATACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAG 55666 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || ||||||| || | || || ||||| ||||| ||||| || | ||| ||||||||| Sbjct 55667 TCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCA 55726 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| |||||||| || || | || ||||| || || || || ||| Sbjct 55727 GGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGAT 55786 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || ||||||| |||||||| ||||| ||||| || || | || || ||||| || Sbjct 55787 TCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCATCTT 55842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905128430800200