Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq546 188 2e-42 seq437 113 1e-19 seq352 91.5 4e-13 >seq546 Length=22432 Score = 188 bits (208), Expect = 2e-42 Identities = 479/728 (66%), Gaps = 3/728 (0%) Strand=Plus/Plus Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 ||||| ||||| |||||||| | || ||| ||||| || ||||| | || ||| Sbjct 11675 TATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAATTTTGTTGATTA 11734 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 ||||| ||||||| |||||||| |||| ||| | || || || || || | || || Sbjct 11735 GATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTTTCAGTTTGAGCT 11794 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810 || | ||| ||| | | | || |||||| | || ||| ||||| Sbjct 11795 TCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCTCTACCTTCTCTT 11854 Query 155811 TCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCAC 155870 |||||||| |||| | | | | || ||||| || |||||||| ||||| Sbjct 11855 TCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTCAAACCAGGTGCT 11914 Query 155871 TTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCA 155930 | | ||| | || | | |||| || ||| || | |||||||||| |||| Sbjct 11915 TCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAATAAATCA 11974 Query 155931 CTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTC 155990 ||| | |||| ||| | || ||||| | || || | ||||| || ||| Sbjct 11975 GGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTC 12034 Query 155991 CGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTA 156050 | | || | || || |||||| | ||| ||||| | ||| | ||||| | Sbjct 12035 CTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCA 12094 Query 156051 CCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGC 156107 ||| || || ||||| || || ||||||| ||||| ||||| ||||| | | | Sbjct 12095 CCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATC 12154 Query 156108 ATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGA 156167 || |||||||| |||||||| || ||||| || ||| ||||| ||||||| ||| | | Sbjct 12155 ATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTA 12214 Query 156168 ACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT 156227 | |||||| ||||||| ||||||||||| | ||| ||||| ||| ||||| || Sbjct 12215 ATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTC 12274 Query 156228 ACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTT 156287 | ||||| | ||||||||||| ||||| || | ||||| | || | || ||| Sbjct 12275 AAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGAC 12334 Query 156288 AATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTA 156347 | |||| || ||| || || | ||||| || || || | ||||| | |||||| | Sbjct 12335 ATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTC 12394 Query 156348 TTAGACAT 156355 || ||||| Sbjct 12395 TTTGACAT 12402 >seq437 Length=40413 Score = 113 bits (124), Expect = 1e-19 Identities = 327/502 (65%), Gaps = 10/502 (2%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||| | | |||| ||| || || ||||| | |||||| || || Sbjct 28179 CTATCAAATCTACCTGGTCTCATTAAAGCTTTATCCAACATATCTGGTCTGTTGGTACCT 28120 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 || | | |||| | || || |||| |||||||| ||||| ||| ||| Sbjct 28119 GCTAGAATGACAACATGGTCAGTAGAGCTAAAGCCATCCATTTCAACTAAAAGTTGGTTA 28060 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttt-- 289027 || || |||| |||| ||||| | |||| || || || | || || Sbjct 28059 AGAGTAGCTTCCTTTTCGTCATTGG---CTCT-----CATTTGATTCTTTTCTCTTGCAC 28008 Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 | |||| ||||| ||||| |||| || || | ||| |||| | | || || || Sbjct 28007 TTCCAATTGCATCGATTTCATCAACAAATATAATACAAGGAGCCATCTTCCTAGCTGTTT 27948 Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 ||| || || | ||||| || || |||| ||||||| ||||||| ||||| |||||| Sbjct 27947 TAAACAAATCACGAACACGAGACGCACCAACACCAACAAACATTTCAACAAACTCAGAAC 27888 Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 | || || | |||| ||| || || |||||| ||| |||| || | || | Sbjct 27887 CAGAGACGGATAAAAATGGAACACCGGCCTCACCTGCTGTAGCCTTCGCTAGCAAAGTTT 27828 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT 289267 |||| || ||||| || || || | | || |||| | ||||| || | || Sbjct 27827 TACCGGTACCAGGAGGACCTGACAAGATGGCACCTCTTGGGATCTTTGCACCTAAACGCT 27768 Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327 ||| || || |||||||||| |||| |||| | ||| | ||||| |||| Sbjct 27767 CATACTTAGAGGGATTCTTTAAAAAGCTGACAAATTCCATGATTTCTTCCTTTGCTTCAT 27708 Query 289328 CACATCCTGCTACATCAGCAAA 289349 |||| ||||| ||||||||||| Sbjct 27707 CACAACCTGCAACATCAGCAAA 27686 >seq352 Length=45524 Score = 91.5 bits (100), Expect = 4e-13 Identities = 317/486 (65%), Gaps = 13/486 (3%) Strand=Plus/Plus Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTT 288933 || |||||||| || | || | | || || |||| || ||||||| | ||| Sbjct 2732 AAAGCTGGGTCCAAAACGTCAACACGATTAGTACCTGCAAAAACAACAACATGATCGTCA 2791 Query 288934 TGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993 ||||||||||||||| || || ||||| | || | ||| ||||||||||| Sbjct 2792 GACTTAAATCCATCCATTTCGACTAGAAGCTGATTTAAGGTGTTTTCTCTTTCATCATT- 2850 Query 288994 GAACCTCTTGAATCAC--CCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAA 289051 ||||| | | | || || ||| |||| || | |||||| ||||| |||| Sbjct 2851 --ACCTCCCATACCTCTTCCCTTTC-CTCTGGATTTT-CCGATAGCATCGATTTCATCAA 2906 Query 289052 TGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATG 289111 ||||| | | | || | ||||| ||| ||| | || || || | ||||| || | Sbjct 2907 CGAAAACAATAGATGGTGCATTTTCTCTTGCAGTCTTGAACAACTCACGAACACGTGACG 2966 Query 289112 CTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACA 289170 | |||| ||||||| ||||||| |||||||||||| | || || || | ||| | || Sbjct 2967 CACCAACACCAACAAACATTTCCACAAATTCAGAACCAGAAAC-AGAGTAGAACGGAACC 3025 Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230 |||||| || || || | || || | || |||||||| || ||||| || | | Sbjct 3026 CCTGCTTCACCAGCAGTGGCTTTAGCAAGTAACGTTTTACCTGTACCGGGTGGACCATTT 3085 Query 289231 AATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT--ATATTTCTCAGGGCTCTTTA 289288 || | | | || || | ||||| || | ||| ||| || | || | |||| Sbjct 3086 AAAATAGCACCTCGAGGGATCTTTGCGCC--TAATCTTTCATACTTTTGGGGATTTTTTA 3143 Query 289289 AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAA 289348 | || |||| ||| || || | ||||| |||| ||| || || |||||| || Sbjct 3144 AGAAACTAACAAACTCCATAATCTCTTCCTTTGCTTCATTACAACCAGCAACATCATTAA 3203 Query 289349 AAGTAA 289354 | |||| Sbjct 3204 ATGTAA 3209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471804984223453