Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq546 250 6e-61
seq544 86.0 1e-11
>seq546
Length=22432
Score = 250 bits (276), Expect = 6e-61
Identities = 583/869 (67%), Gaps = 19/869 (2%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
||||||||||||||||||| | ||| | |||| | | | | ||||| ||||
Sbjct 12548 ACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTG 12489
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
||| | || ||||| | | | | ||||| ||||||||||||| ||||||||
Sbjct 12488 CCGAAAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTG 12429
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT-----CATGCTAC 110476
| ||||||||||| |||| || | | || ||| || |||| |||||| |
Sbjct 12428 ATTCTGTTATTGAAACTTATAATTTGAT--GTCAAAG---AGGTATTTCACACATGCTTC 12374
Query 110477 TCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAG 110535
||| || || || || | || ||| || ||| || |||| || |||||| | |
Sbjct 12373 TCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTCATG-TTTCTTAGTTG 12315
Query 110536 GAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTT 110595
||| || || ||||| ||||||||||| |||||| || | |||||| |||| | ||||
Sbjct 12314 CAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTT 12255
Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655
| |||| |||| || ||||| | || | ||| ||||| | |||| || | |||
Sbjct 12254 CCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATCAACTGGTTCTTATA 12195
Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715
| || | || ||| | || | ||| || |||||||| | || ||||| || |||
Sbjct 12194 TTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAGGGTCTTTAATAACA 12135
Query 110716 CTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCG 110772
|||||| ||||| | |||||||| ||| ||| ||| | ||||| | ||| | |
Sbjct 12134 CTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACCTGGTGCGTTTGCACTATATATTG 12075
Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832
| ||||||||||||||||| |||| || | || | | ||||| || || ||||
Sbjct 12074 AGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAAAGAAG 12015
Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892
|| |||||| | |||||||| ||| | |||||| | |||||||| ||| || | |
Sbjct 12014 AAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGAAAGAG 11955
Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952
|| | |||||| ||| || | | | ||| | | |||||| | |||||
Sbjct 11954 TTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAGTGATG 11895
Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCA-AGTTTCGC 111011
||||||| | || || |||| | || |||||||||| |||||| | || |
Sbjct 11894 TATATGGTGATGAATTCAAAGAATTATATACCAAATATGAAAGAGAAGGTAGAGGCAGGA 11835
Query 111012 AAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071
||| |||| ||| ||| | | |||| ||| | ||| | ||| |||||||||
Sbjct 11834 GAAC-AATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGAAACTGGT 11776
Query 111072 ACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130
|| |||| || || ||||| ||| ||| ||| |||||||||||| ||||| ||
Sbjct 11775 ACACCTTTCATGTTATATAAGGATGCAT-GTAACAAGAAATCTAATCAACAAAATTTGGG 11717
Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159
|| || ||| ||||| |||||||
Sbjct 11716 TGTTATCAAATCTTCCAATTTATGCTGTG 11688
>seq544
Length=41639
Score = 86.0 bits (94), Expect = 1e-11
Identities = 113/154 (73%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT-CA 304947
||||||||| |||| || | ||||||||||| |||||||| |||||| ||| ||
Sbjct 16709 CAATATCATGTTGCTACTTATATGGATAATGATATTGCTGGTCAGCCGCAGGC-TCTACA 16767
Query 304948 AAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTAT 305007
| ||| || ||||| | || |||||| || |||| ||||||||||||||| |
Sbjct 16768 GAAATCAGGTAGACCGATCAAATCTATTAGAGCTCGTCTTAAGGGTAAAGAGGGTCGTTT 16827
Query 305008 TCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041
||||||| | ||||| || | |||||||||
Sbjct 16828 GAGAGGTAACTTGATGGGTAAGAGAGTTGATTTT 16861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186802627159909
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |