Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq572 141 2e-28 seq509 114 3e-20 >seq572 Length=74374 Score = 141 bits (156), Expect = 2e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || || || || ||||| ||| ||||||||| | Sbjct 55831 TTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGACACCAT 55772 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| || ||||||||||| ||||| || ||||| ||| || ||| |||||||| Sbjct 55771 CGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAACAAAGACT 55712 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 |||||| || || ||||| || |||||||| || ||||| |||| |||||| |||| || Sbjct 55711 TATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAACATCCAAAA 55652 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || ||||| |||||| | || |||||| Sbjct 55651 GGAATCTACCCTTCACTTGGTCTTGAGA 55624 >seq509 Length=17948 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || || || || || || ||||| || |||||||| |||| Sbjct 2097 AAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCTGACACTATCGACAAT 2038 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || ||||| || ||||| ||| || ||| |||||||||||||| Sbjct 2037 GTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGACTTATCTTT 1978 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| || |||||||| || |||||| | || |||||| | || || || ||| Sbjct 1977 GCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAGGAATCT 1918 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 ||||||||| | || |||||| Sbjct 1917 ACTCTTCACTTAGTCTTGAGA 1897 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 |||||| || | |||||||||||| || || || | || ||||||| |||||| || || Sbjct 1897 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1956 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||| | ||||| || || |||||||| | |||||| Sbjct 1957 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTG 1995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181810669949149