Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq546 554 6e-153 seq122 260 2e-64 >seq546 Length=22432 Score = 554 bits (614), Expect = 6e-153 Identities = 1400/2102 (67%), Gaps = 51/2102 (2%) Strand=Plus/Plus Query 68410 AGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGT 68469 || || |||||||| || || | || |||| || ||||||||||| |||| | Sbjct 10754 AGGTAATACATACCTGTCTTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 10813 Query 68470 TTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCT 68529 || |||||| | ||| || ||||| ||||| ||||| | | | || Sbjct 10814 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 10873 Query 68530 CCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAA 68589 |||||||| || ||||| | ||||| ||||||| | || ||||| | ||||||| | Sbjct 10874 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 10933 Query 68590 ATCTGTTTGATATCATCTGGAAGGCTCG-TA--TTTTGAATGGATCCACCATCGGATATA 68646 | | ||||| || | |||| ||| || || ||||| || ||| ||| || || Sbjct 10934 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 10993 Query 68647 ATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGC 68706 || || || || ||||||||| | | | || |||| |||| | | || Sbjct 10994 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAA 11053 Query 68707 GGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATAT 68766 || ||||| || || ||||| || | ||| ||||| | || ||||||||| || || Sbjct 11054 GGGTTAACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 11113 Query 68767 GGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCC 68826 ||||| | |||| || | || |||||||||| ||||| ||||| ||||| ||||| Sbjct 11114 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 11173 Query 68827 ACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCC 68886 || | || |||||| | ||||| | ||||||| || |||| ||| ||||| Sbjct 11174 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTA-ATG-----AATCC 11227 Query 68887 CAA--AGATCAGATGGTA--CAACATTCC--AAAGATCGTATTGTAGAATTCCGTTACTT 68940 || | || || |||| | | | || ||||||| | ||||| | || | | Sbjct 11228 CAGTCATATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGAT 11287 Query 68941 GCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCC 69000 ||| ||||| | | | || ||||| ||||| ||| | || |||| ||||||| Sbjct 11288 GCAGGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATGGATAATTCAACACTTGCC 11347 Query 69001 TCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGA 69060 || || ||| | | |||||| ||||| ||||| | |||| || || | ||||||| | Sbjct 11348 TCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGC 11407 Query 69061 CTATCGAATGGATAATGTAAA-AGAATAAATGCATCTGCCAATCCCTGAACCCCAATACC 69119 ||| ||||| |||| | || | || || ||||||||||| || || || |||| | | Sbjct 11408 GAATCAAATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGC 11466 Query 69120 GATAGGTCTATGTCTCTTATTTGAACTTT---CAGCTTCTGGAATAGGATAATAATTAAT 69176 || ||||| | |||| ||||||| ||| ||| ||| || |||||| || || | Sbjct 11467 AATTGGTCTGTTTCTCATATTTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCT 11523 Query 69177 ATCTATAATTTTATT-AAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAA 69235 ||| || |||||||| ||| ||| | | || || || | || | || || || Sbjct 11524 ATCGATGATTTTATTCAAGTTTTTAGTC-ACAACCTTTGTAATTTCATGTAACTTCTCAA 11582 Query 69236 AATCAAATC----GTCCATCT-ATAACA---AACATATTCAG----TGCTACAGATGCTA 69283 | | | | | || | | | || || |||| || ||| ||| ||| |||| Sbjct 11583 AGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTA 11642 Query 69284 GATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTAC 69343 ||||||||||||| || | || || ||||| | || || |||| ||| Sbjct 11643 AATTACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGG 11702 Query 69344 TACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAA 69403 | |||||||| |||| |||||| |||||| || |||||||| || ||||| || | Sbjct 11703 AAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATA 11762 Query 69404 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCA-AACGACCCTA 69462 || || || |||||||||||| | |||| ||| | || || | ||| ||| | Sbjct 11763 ACATGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGT- 11821 Query 69463 GCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGA 69520 || || ||| | ||| | | || | ||| ||||||||| ||||||| || || Sbjct 11822 GCTTTAATT--GTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGA 11879 Query 69521 ATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACA 69580 ||||||| || | |||||| ||| ||||| |||| | || | | || | ||| Sbjct 11880 ATTCATCACCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAAT 11939 Query 69581 CATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGAT 69640 | |||| | || ||||| || |||||||| ||| |||||||| | ||| || | || Sbjct 11940 CTTCATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAAT 11999 Query 69641 CTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATAT 69700 |||| | |||| ||||||| || || ||||| | | ||| | ||| || | ||||| Sbjct 12000 CTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATAT 12059 Query 69701 CAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGAT 69760 | |||||||| || || | ||||| || | | || |||| |||||| || || || | Sbjct 12060 CTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGT 12119 Query 69761 CTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTAC 69820 | | || || |||||||||||| |||| || | ||| |||||||| ||||| ||| ||| Sbjct 12120 CAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTAC 12179 Query 69821 CATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTC 69880 |||| || || | ||||||| || ||| | ||||||| ||| || || || | Sbjct 12180 CATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATAC 12239 Query 69881 CTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGC 69940 | || || |||| || || | |||||| |||||| || ||||| ||||| || ||| Sbjct 12240 CACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGG 12299 Query 69941 TATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCAT 70000 ||| || |||| || | ||||| ||||||||||| | ||| |||| || Sbjct 12300 AATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAAT 12359 Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060 | || | || ||||| || || ||||| | | | || | || ||| || ||||||| Sbjct 12360 TGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAA 12419 Query 70061 TAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGA 70119 || | || || ||||| ||| |||||| || | || || | ||| | | ||| || Sbjct 12420 TAACAGAATCAATATCATCAC-CATGAATACCAACGGCAACTCTCATTATTAAATGTTGG 12478 Query 70120 GGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAAC 70179 || | ||| | | ||| ||||||| | || || || |||| | ||||| || Sbjct 12479 GGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAA 12538 Query 70180 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTA 70239 ||||||||||| || |||||||| || ||| ||| || || || | ||| | | Sbjct 12539 CCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCGCA 12598 Query 70240 TATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTA 70299 | ||| || || ||| | ||| || || |||| |||||||||||||| Sbjct 12599 TTTTTTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTA 12658 Query 70300 GGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTG 70359 |||| || ||| | ||| | | | || ||| ||| || |||||| ||| Sbjct 12659 GGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTT 12718 Query 70360 TGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG--TTG-TGTA 70416 ||||| ||||| || || | ||| || || | | ||||| || ||||| | | ||| Sbjct 12719 TGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTC 12778 Query 70417 GTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTA 70476 || ||| ||| | |||| |||||||| |||||||||| | ||||||||| || | | Sbjct 12779 ATATAAGCAGCAG---TTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCATCA 12835 Query 70477 TA 70478 || Sbjct 12836 TA 12837 >seq122 Length=40810 Score = 260 bits (288), Expect = 2e-64 Identities = 592/886 (67%), Gaps = 16/886 (2%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| || || | || |||||||| || ||||| || | | || || || Sbjct 14477 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 14536 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| || || || ||||| || | | ||| |||| | | |||||| | |||| Sbjct 14537 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGC---AATC 14593 Query 39446 AAT---CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 | | |||||||||||||| || | || ||||| || |||||| || | Sbjct 14594 AGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGC 14653 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 | || || ||||| || || || | | | ||||| || || ||||| || || || Sbjct 14654 AAGTTGACAGGTAGGGCGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATG 14713 Query 39563 ATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCG 39622 || | | || | | || || | ||| |||||| ||| | || || || Sbjct 14714 ATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCA 14773 Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682 || || ||||| || |||||||||| ||| | ||||| || || || | || ||| Sbjct 14774 AAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGC 14833 Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742 || | ||| | |||||| | ||| || |||| ||||| || ||||| ||||| || ||| Sbjct 14834 ATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCT 14893 Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCAC 39799 || || || |||||||| || | |||||| | | | ||| |||| | ||||| Sbjct 14894 TCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCAT 14953 Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 39859 || ||||| || || || | ||| | ||| || |||||||| || ||||| || | Sbjct 14954 TTTAAGGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAG 15013 Query 39860 TAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAA 39919 | | |||| | |||||| | || ||||| || || | | ||| |||| ||| Sbjct 15014 AATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAA 15073 Query 39920 TGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACC 39979 || |||||||| ||| || || || || || |||||| | || || | |||||| || Sbjct 15074 TGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACA 15133 Query 39980 TC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAA 40037 || | | ||| ||| | | ||||||||||| ||||| |||||| ||| ||||| | Sbjct 15134 TCACTTGAGAAATTCT--CAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGA 15191 Query 40038 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCAT 40094 | || | || | ||| || || |||||| ||||| || ||||| |||| Sbjct 15192 ACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCAT 15251 Query 40095 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGT 40154 | |||||| || | ||| | ||| || || ||||| || || || |||||||| |||| Sbjct 15252 GCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGT 15311 Query 40155 ACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCT 40200 |||| | ||| || || |||| | |||||||| | |||||| || Sbjct 15312 ACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 15357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903055725160