Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq122 269 2e-67
seq196 127 2e-24
>seq122
Length=40810
Score = 269 bits (298), Expect = 2e-67
Identities = 595/875 (68%), Gaps = 33/875 (4%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|||||||| | |||||||| | ||||| || || |||||||||||||| || ||| |
Sbjct 15357 AGGTTTGTTCTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAA 15298
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGAT--- 43812
|| || || ||||| || || ||| ||||| | | ||||| || ||| ||||||
Sbjct 15297 GCATCTTTCTGGACTGCGGAGGAAATTGATCTCTCCAAAGATTT-GCATGATTGGAACAA 15239
Query 43813 TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872
| ||| || | | |||| | || || || ||| | ||||| ||||||||
Sbjct 15238 TAGATTGAACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTC 15179
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAG--AAGTTCAATTACCA 43930
|| || ||||||||||||||||| ||| | || | |||| | |||||| | |||
Sbjct 15178 TGATGGTATAGTCAATGAAAATTTAGTTGA--GAATTTCTCAAGTGATGTTCAAATTCCA 15121
Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990
|| || |||||| |||||||| |||||| || ||||| ||||||||||||| ||
Sbjct 15120 GAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTAT 15061
Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAA 44046
| | |||| ||||| |||||||||||| || | | ||| || || || ||
Sbjct 15060 TCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAAAGTGAAT--TC--TTATTCAA 15005
Query 44047 TGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT--- 44103
||| || |||||| | || || || | || || || |||||| | ||||||||
Sbjct 15004 TGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCCTTAAAATGGATTGC 14945
Query 44104 AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTT 44163
| || | ||| | |||| ||| | | || || ||||| | ||| ||||| |||||
Sbjct 14944 AGATAAAGATGCGTTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTT 14885
Query 44164 CTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223
||| || || || ||||| |||| || ||||| || || ||||||||||||| || ||
Sbjct 14884 CTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTT 14825
Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283
|||||| || || ||| | || || | |||||||| |||||| |||||||||||| ||
Sbjct 14824 GACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTT 14765
Query 44284 GTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAG--ATATTGTT 44341
| | || | || | || || || | || | | || | | | ||| | || ||
Sbjct 14764 GCTCTTTTCACATTT--GA-ACCAT-ACCCCAGACG-AAAAAATTGTCAGACAAATCATT 14710
Query 44342 GTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATA 44401
|| || || | || ||| | ||| | || || ||||||| || || |
Sbjct 14709 ACCGAAGCCGTTGATATTGAAAAGAAATACTTCACTGACGCCCTACCTGTCAACTTGCTC 14650
Query 44402 GGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTG 44461
|| |||||| | ||||||| || ||| | || | |||||||| | |||| |
Sbjct 14649 GGTATGAATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTTGCAGATAGACTACTGATT 14590
Query 44462 GAACTGGGTTGCGATAA---ACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAAT 44518
| | | ||||| || || | || | | ||| ||| || || || |||||||| ||
Sbjct 14589 GCATTAGGTTGTGAAAAGGTATACGACGT--TAC-AAATCCATTCGACTTTATGGAGAAC 14533
Query 44519 ATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAA 44553
||||| | | || |||||||||||||| |||||
Sbjct 14532 ATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAA 14498
>seq196
Length=21318
Score = 127 bits (140), Expect = 2e-24
Identities = 379/580 (65%), Gaps = 26/580 (4%)
Strand=Plus/Minus
Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301
||||||||| || |||||| || ||| || || | |||||||||| || | |
Sbjct 12063 AATTGGAGGTTTAGATAAAGAATTCACTGCTATTTTCAGAAGAGCATTTGCATCAAGAAT 12004
Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTT 19360
||| | ||| ||| ||| | || |||| ||| | || | || | || || |
Sbjct 12003 CTTTCCACCAGGTGTTATTGAGAAAATGGGCATG-ACGCACATCAAAGGTATGTTACTCT 11945
Query 19361 ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA--- 19417
| || || || ||| ||| ||||| || ||||| ||| || | |||| | ||||
Sbjct 11944 ACGGTCCCCCTGGTACTGGTAAAACCTTGATTGCTAGACAAATCGGTAAGATGCTTAATG 11885
Query 19418 CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAAT 19477
|||| |||| |||||||| || || |||||||| || || ||||| ||| ||
Sbjct 11884 CAAAGGAACCA---AAAATTGTCAACGGACCTGAAATTTTGTCCAAGTATGTCGGTTCAT 11828
Query 19478 CGGAAGAAAATGTACGACGTTTGTT------TGCTGACGCTGAAGAAGAACAAAAACGTT 19531
| ||||| || | || |||||| ||| || | |||| | || ||||| | |
Sbjct 11827 CTGAAGAGAACATTCGTAATTTGTTCAAGGATGCAGAGGATGAATAC-AAGAAAAAGGGT 11769
Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591
| | | | || | || ||||| || | ||||||||||| | | | || |
Sbjct 11768 GATGCGTC-----TGCTCTACATATTATCATCTTTGATGAATTGGATTCCGTTTTCAAAC 11714
Query 19592 AAAGAGGTTCTGG------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645
|||||||||| | || || ||| || || | |||||||||||| | ||
Sbjct 11713 AAAGAGGTTCAAGAGGCGATGGAACTGGTGTTGCGGATAATGTTGTCAATCAGTTGTTGG 11654
Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705
| || | || ||||| | ||| | |||||||| || || ||||| ||||||||||||
Sbjct 11653 CTAAGATGGATGGTGTCGATCAATTAAATAATATATTGGTCATTGGTATGACTAATAGAA 11594
Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765
|| ||||| ||||| ||| || | |||| ||| | || || | | | ||||||
Sbjct 11593 GAGATTTAATTGACAGTGCCCTACTGAGACCTGGTAGATTTGAGGTTCAAGTTGAAATTC 11534
Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACAT 19805
| ||||| |||||| || | || ||||||| || ||
Sbjct 11533 ATTTACCTGATGAAGAAGGTAGATTGCAAATTTTGAAAAT 11494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397452759367345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |