Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq122 269 2e-67 seq196 127 2e-24 >seq122 Length=40810 Score = 269 bits (298), Expect = 2e-67 Identities = 595/875 (68%), Gaps = 33/875 (4%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 |||||||| | |||||||| | ||||| || || |||||||||||||| || ||| | Sbjct 15357 AGGTTTGTTCTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAA 15298 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGAT--- 43812 || || || ||||| || || ||| ||||| | | ||||| || ||| |||||| Sbjct 15297 GCATCTTTCTGGACTGCGGAGGAAATTGATCTCTCCAAAGATTT-GCATGATTGGAACAA 15239 Query 43813 TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 | ||| || | | |||| | || || || ||| | ||||| |||||||| Sbjct 15238 TAGATTGAACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTC 15179 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAG--AAGTTCAATTACCA 43930 || || ||||||||||||||||| ||| | || | |||| | |||||| | ||| Sbjct 15178 TGATGGTATAGTCAATGAAAATTTAGTTGA--GAATTTCTCAAGTGATGTTCAAATTCCA 15121 Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990 || || |||||| |||||||| |||||| || ||||| ||||||||||||| || Sbjct 15120 GAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTAT 15061 Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAA 44046 | | |||| ||||| |||||||||||| || | | ||| || || || || Sbjct 15060 TCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAAAGTGAAT--TC--TTATTCAA 15005 Query 44047 TGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT--- 44103 ||| || |||||| | || || || | || || || |||||| | |||||||| Sbjct 15004 TGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCCTTAAAATGGATTGC 14945 Query 44104 AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTT 44163 | || | ||| | |||| ||| | | || || ||||| | ||| ||||| ||||| Sbjct 14944 AGATAAAGATGCGTTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTT 14885 Query 44164 CTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223 ||| || || || ||||| |||| || ||||| || || ||||||||||||| || || Sbjct 14884 CTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTT 14825 Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283 |||||| || || ||| | || || | |||||||| |||||| |||||||||||| || Sbjct 14824 GACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTT 14765 Query 44284 GTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAG--ATATTGTT 44341 | | || | || | || || || | || | | || | | | ||| | || || Sbjct 14764 GCTCTTTTCACATTT--GA-ACCAT-ACCCCAGACG-AAAAAATTGTCAGACAAATCATT 14710 Query 44342 GTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATA 44401 || || || | || ||| | ||| | || || ||||||| || || | Sbjct 14709 ACCGAAGCCGTTGATATTGAAAAGAAATACTTCACTGACGCCCTACCTGTCAACTTGCTC 14650 Query 44402 GGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTG 44461 || |||||| | ||||||| || ||| | || | |||||||| | |||| | Sbjct 14649 GGTATGAATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTTGCAGATAGACTACTGATT 14590 Query 44462 GAACTGGGTTGCGATAA---ACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAAT 44518 | | | ||||| || || | || | | ||| ||| || || || |||||||| || Sbjct 14589 GCATTAGGTTGTGAAAAGGTATACGACGT--TAC-AAATCCATTCGACTTTATGGAGAAC 14533 Query 44519 ATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAA 44553 ||||| | | || |||||||||||||| ||||| Sbjct 14532 ATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAA 14498 >seq196 Length=21318 Score = 127 bits (140), Expect = 2e-24 Identities = 379/580 (65%), Gaps = 26/580 (4%) Strand=Plus/Minus Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301 ||||||||| || |||||| || ||| || || | |||||||||| || | | Sbjct 12063 AATTGGAGGTTTAGATAAAGAATTCACTGCTATTTTCAGAAGAGCATTTGCATCAAGAAT 12004 Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTT 19360 ||| | ||| ||| ||| | || |||| ||| | || | || | || || | Sbjct 12003 CTTTCCACCAGGTGTTATTGAGAAAATGGGCATG-ACGCACATCAAAGGTATGTTACTCT 11945 Query 19361 ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA--- 19417 | || || || ||| ||| ||||| || ||||| ||| || | |||| | |||| Sbjct 11944 ACGGTCCCCCTGGTACTGGTAAAACCTTGATTGCTAGACAAATCGGTAAGATGCTTAATG 11885 Query 19418 CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAAT 19477 |||| |||| |||||||| || || |||||||| || || ||||| ||| || Sbjct 11884 CAAAGGAACCA---AAAATTGTCAACGGACCTGAAATTTTGTCCAAGTATGTCGGTTCAT 11828 Query 19478 CGGAAGAAAATGTACGACGTTTGTT------TGCTGACGCTGAAGAAGAACAAAAACGTT 19531 | ||||| || | || |||||| ||| || | |||| | || ||||| | | Sbjct 11827 CTGAAGAGAACATTCGTAATTTGTTCAAGGATGCAGAGGATGAATAC-AAGAAAAAGGGT 11769 Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591 | | | | || | || ||||| || | ||||||||||| | | | || | Sbjct 11768 GATGCGTC-----TGCTCTACATATTATCATCTTTGATGAATTGGATTCCGTTTTCAAAC 11714 Query 19592 AAAGAGGTTCTGG------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645 |||||||||| | || || ||| || || | |||||||||||| | || Sbjct 11713 AAAGAGGTTCAAGAGGCGATGGAACTGGTGTTGCGGATAATGTTGTCAATCAGTTGTTGG 11654 Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705 | || | || ||||| | ||| | |||||||| || || ||||| |||||||||||| Sbjct 11653 CTAAGATGGATGGTGTCGATCAATTAAATAATATATTGGTCATTGGTATGACTAATAGAA 11594 Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765 || ||||| ||||| ||| || | |||| ||| | || || | | | |||||| Sbjct 11593 GAGATTTAATTGACAGTGCCCTACTGAGACCTGGTAGATTTGAGGTTCAAGTTGAAATTC 11534 Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACAT 19805 | ||||| |||||| || | || ||||||| || || Sbjct 11533 ATTTACCTGATGAAGAAGGTAGATTGCAAATTTTGAAAAT 11494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397452759367345