Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq546 241 2e-58
seq352 89.7 6e-13
>seq546
Length=22432
Score = 241 bits (266), Expect = 2e-58
Identities = 896/1382 (65%), Gaps = 43/1382 (3%)
Strand=Plus/Plus
Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757
|||||| ||| || || | ||||| |||||||||||||| || | ||| | |||||
Sbjct 11086 TCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTG 11145
Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCC 110815
| || || || || ||||||||||| | | || || | | | || || || ||
Sbjct 11146 AGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTCTCAAA--CCATTGGCC 11203
Query 110816 TTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTT-CACCTT--CCCAC 110872
||||| ||||| | ||||||||| || | || |||||| | ||| ||||
Sbjct 11204 TTGATTTTCTCCTTTAATGAATCCCAGTCATA--TAAG-TTGGTTGGCTTCTTACCCCAA 11260
Query 110873 ATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCT 110932
| |||||||| || | |||||||| || ||||| || ||||| || ||||| | ||
Sbjct 11261 AGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGTCTCATATGGTCCA 11320
Query 110933 TGGGCTTCA--GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGA 110990
| | | | | |||||| || ||||||| | || ||||| ||||||||||| |
Sbjct 11321 TC--CCTAATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAATGGTTTCAAAAA 11378
Query 110991 TACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATA 111050
| || ||||| ||||| ||||| |||||||||| | | ||| || ||
Sbjct 11379 TTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGGTAATCTCAACATCATGAAGG 11438
Query 111051 CATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCG 111110
|||| || | |||||| ||||| | | |||| ||||||| || |||||| || ||| |
Sbjct 11439 CATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATATTTGATCTTCTTG 11498
Query 111111 CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 111170
|||| ||||| ||||| | ||||| || |||| | || | ||||| || |||| ||
Sbjct 11499 CAGTTTCAACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGTTTTTAGTCACAACCT 11558
Query 111171 TTGTGATTTCATGAAGTTTTTCATA-----ATCAAAAGTGCGAGTC-TC---TTCATTGA 111221
|||| |||||||| | || ||| | | ||| ||| | ||| || |||| |
Sbjct 11559 TTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTTGTCATCACTTTCA---A 11615
Query 111222 CATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGT 111281
|| | || | || | || ||||| ||||| || || || || || |
Sbjct 11616 CAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCCTCAGGTGATGAAT 11675
Query 111282 ACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTAC 111341
| || | |||||| ||||| |||||| || || |||||||| | ||| |||
Sbjct 11676 ATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAATTTTGTTGATTAG 11735
Query 111342 TCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATT 111401
|||||||| || |||||||| || | |||| | || || || || || || || | ||
Sbjct 11736 ATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTTTCAGTTTGAGCTT 11795
Query 111402 TGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGG--CGTTGGCCCGTCCCTCCG 111458
| || | | ||| ||| | | || | ||| | | ||| | ||| |
Sbjct 11796 CTAAGATCGAATACCATAACTTTTG----TGCTTTAATTGTTCTCCTGCCTCTACCTTCT 11851
Query 111459 C-CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGT 111517
| || || || || || | ||| || || ||||| | || | ||| |||
Sbjct 11852 CTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTCAAACCAGGT 11911
Query 111518 GCCTTGTCT-GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAG 111576
| ||| || || |||| | || ||| | || || |||||| | | ||| || |
Sbjct 11912 G-CTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAATAA 11970
Query 111577 GTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTT 111636
|| |||||||| | | | || | |||||| | | ||||| | ||| |||||
Sbjct 11971 ATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTGGTT 12030
Query 111637 GAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGAT 111696
| | |||| || || | ||||| | ||||| ||||||| ||| | ||| |
Sbjct 12031 TTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAA 12090
Query 111697 AGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGC 111752
| || |||| | ||| |||| | ||||| | || ||| ||||| || |
Sbjct 12091 CGCACCAGGTCTTT-TATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCC 12149
Query 111753 GAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGG 111812
|| |||||||||||| |||| ||| |||||| || || |||| ||| | | |
Sbjct 12150 TAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTG 12209
Query 111813 CTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACT 111872
||| | || ||| || || | ||||||||| ||||| || || || ||||| |
Sbjct 12210 ATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATT 12269
Query 111873 CCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAAC 111932
| | | ||| |||||||||| | || || || ||||| | || | | ||| ||
Sbjct 12270 CTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATG 12329
Query 111933 TGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA 111992
||||| || |||||| ||||| | |||||| || ||||| | || || |||| |
Sbjct 12330 AAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAA-A 12388
Query 111993 TACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 112051
||||| | |||||| | || || || | ||||||||||| || || || || ||
Sbjct 12389 TACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACCATGAATA 12448
Query 112052 CC 112053
||
Sbjct 12449 CC 12450
>seq352
Length=45524
Score = 89.7 bits (98), Expect = 6e-13
Identities = 271/414 (65%), Gaps = 5/414 (1%)
Strand=Plus/Plus
Query 11444 ATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTA 11503
|| || |||||||| | |||||| | || | || || | | || || ||||||
Sbjct 2702 ATTTTACGATCAAATCTACCCGGTCTTAGCAAAGCTGGGTCCAAAACGTCAACACGATTA 2761
Query 11504 GTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAAT 11563
|| | |||| ||| |||| | ||| | ||| |||||||| ||| || |
Sbjct 2762 GTACCTGCAAAAACAACAACATGATCGTCAGACTTAAATCCATCCATTTCGACTAGAAGC 2821
Query 11564 TGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGT-TGC-- 11620
||||| | || | |||||| |||||||| || |||||| | | | | | ||
Sbjct 2822 TGATTTAAGGTGTTTTCTCTTTCATCATTACCTCCCATACCTCTTCCCTTTCCTCTGGAT 2881
Query 11621 TTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 11680
|| || | ||||| || ||||||| ||| |||||| ||||| |||||| | || |
Sbjct 2882 TTTCCGATAGCATCGATTTCATCAACGAAAACAATAGATGGTGCATTTTCTCTTGCAGTC 2941
Query 11681 TCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG 11740
| || | || ||||| | | ||||| |||||||||||||| |||||||| | |
Sbjct 2942 TTGAACAACTCACGAACACGTGACGCACCAACACCAACAAACATTTCCACAAATTCAGAA 3001
Query 11741 GCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 11799
|||| || | | ||| || || || |||||| || ||||| || || | ||
Sbjct 3002 CCAGA-AACAGAGTAGAACGGAACCCCTGCTTCACCAGCAGTGGCTTTAGCAAGTAACGT 3060
Query 11800 CTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
|| || ||||| || ||| | || || ||||| |||||||| || ||
Sbjct 3061 TTTACCTGTACCGGGTGGACCATTTAAAATAGCACCTCGAGGGATCTTTGCGCC 3114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628026748082400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |