Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq546 199 5e-46 seq122 109 7e-19 >seq546 Length=22432 Score = 199 bits (220), Expect = 5e-46 Identities = 685/1051 (65%), Gaps = 34/1051 (3%) Strand=Plus/Plus Query 117840 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 117899 ||||| ||||| || ||||||| ||||| |||||| |||| | |||||| || | || Sbjct 10754 AGGTAATACATACCTGTCTTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 10813 Query 117900 TTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 117959 || | |||||| ||| || || ||||||| ||| || ||||| | | | Sbjct 10814 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 10873 Query 117960 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAG 118019 || | ||| || |||||||| || | ||| | ||| ||||| |||||| | || Sbjct 10874 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 10933 Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079 | || ||| || || | || |||| | | || || || || ||| | || Sbjct 10934 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 10993 Query 118080 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTCCACGAG 118135 || | | |||||| || || |||||| || || | | ||| ||| || | Sbjct 10994 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACTAAATCTCTCAAC-AT 11049 Query 118136 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCG 118194 || || |||| || ||||| || | | ||| ||| || ||||||| | Sbjct 11050 ATAAGGGTTAACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 11108 Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254 |||| || |||||||| || |||| ||| | ||||| | ||| || || || ||||| | Sbjct 11109 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 11168 Query 118255 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCC 118314 |||| | || | || | | ||| || || | || ||||| | | |||| Sbjct 11169 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 11228 Query 118315 AGTCGTAGTTGAGCT--TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372 |||| || | || | ||| || | ||| | ||||||||| |||| ||||||||| Sbjct 11229 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 11286 Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 118430 || || ||||| ||||| ||||||||||| || || ||| | ||||| || Sbjct 11287 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTAATGGATAATTCAACACTT 11344 Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490 ||||| | || || ||||| || ||||||||||| || ||||| | |||| || || Sbjct 11345 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 11404 Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 |||||||| | | || ||| || || |||| || | |||||||||||| | Sbjct 11405 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 11464 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610 ||||||| | | ||||||||| || | | || || || || ||||| | || ||| Sbjct 11465 GCAATTGGTCTGTTTCTCATATTTGATCTTCTTGCAGTTTCAACAGGATAGTAGTTTCTA 11524 Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC---G 118667 ||||| | |||| | ||||| || ||||||||||| |||||||| | ||| || | Sbjct 11525 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAG 11584 Query 118668 TAAT--CAAAACTGCGAGTC-TC---TTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 | || ||| | | | ||| || |||| ||| | ||| | || | || Sbjct 11585 TTATACCAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCT 11641 Query 118722 AGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 | |||||| || | || || || | || | || || | |||||| ||| || | Sbjct 11642 AAATTACAAACTGCTGTTTCCTCAGGTGAT--GAATATTCAACAATTTCACAGCATAAAT 11699 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | ||| || || ||||| || | |||||| || || ||||||| |||||||| | Sbjct 11700 TGGAAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTAT 11759 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 | | |||| | || || || || || ||||| Sbjct 11760 ATAACATGAAAGGTGTACCAGTTTCAGTTTG 11790 >seq122 Length=40810 Score = 109 bits (120), Expect = 7e-19 Identities = 327/493 (66%), Gaps = 19/493 (4%) Strand=Plus/Plus Query 130049 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 130108 || || || || ||||| || ||||||||| | ||| | ||| ||||||||||| || Sbjct 14804 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 14863 Query 130109 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCA 130168 | |||||| ||||||||||| || || || ||| || || || | | | ||| Sbjct 14864 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 14923 Query 130169 GCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGAT 130227 ||||| | || |||| | | ||| ||| || | ||||| | ||||||| || ||| Sbjct 14924 GCAAA-CAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGGCCTTTTCCTTGAT 14982 Query 130228 ACACGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 130284 ||| |||| || | || || || | |||| ||| |||| || |||||||||||| Sbjct 14983 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 15039 Query 130285 GTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCATTT-CATTATGGCACTGAT 130343 ||| |||| || | | ||||| ||||| ||| | ||| ||| || || Sbjct 15040 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 15098 Query 130344 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAAATTGTTATTGATAT 130403 || | |||||| | || || || || || ||| || ||||| | | | || Sbjct 15099 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 15158 Query 130404 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 130460 | ||| || || ||||| || ||||||| ||||| || | | | | | |||| Sbjct 15159 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 15218 Query 130461 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCT 130517 | |||||| ||||||| | ||||| || | | ||| || |||||||| | | Sbjct 15219 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 15275 Query 130518 CCTCCGCAGTCCA 130530 ||||||||||||| Sbjct 15276 CCTCCGCAGTCCA 15288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618430028335640