Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq546 300 2e-76 seq122 95.1 1e-14 >seq546 Length=22432 Score = 300 bits (332), Expect = 2e-76 Identities = 1174/1825 (64%), Gaps = 37/1825 (2%) Strand=Plus/Minus Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGG 104197 ||||||| | | | | ||||||||| ||||||| | || | ||| |||||| | | Sbjct 12564 AGAGACTTCAATTATAACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGA 12505 Query 104198 CTCGATGGTGTCTTGATGGAAACCCCACAGTACATGT--TCATGCGCGTGGCCATCGGTA 104255 | ||||| | |||| || || |||| | | ||| | || ||| | |||| Sbjct 12504 ATAAATGGTAAGATTGCCGAAAGGCCCCA--ACATTTAATAATGAGAGTTGCCGTTGGTA 12447 Query 104256 TTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATG 104314 ||||||| || || ||||||||||| | || || || | |||||| | |||||| Sbjct 12446 TTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGGTAT- 12388 Query 104315 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGT 104374 |||| || || | ||||| || |||||| | ||||| |||||| |||||||| Sbjct 12387 TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTCA 12328 Query 104375 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 104434 || ||| | | || | ||||| || || || | |||||||||| ||| | | || Sbjct 12327 TGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAA 12268 Query 104435 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 104494 ||||| || || || ||||| ||||||||| | || || ||| || | ||| | Sbjct 12267 TGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATCA 12208 Query 104495 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 104554 | | ||| |||| || || |||||| ||| |||| |||||||||||| || | Sbjct 12207 ACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAGG 12148 Query 104555 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTAT 104610 || ||||| ||| || | ||||| | |||| ||| | |||| || | | Sbjct 12147 GTCTTTAATAACACTGCAAGGTATGTTGACCAAGGTGGTAATA-AAAGACCTGGTGCGTT 12089 Query 104611 CGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAA 104670 ||| | ||| ||||||| ||||| | ||||| | || || |||| | | || Sbjct 12088 TGCACTATATATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAA 12029 Query 104671 CCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCT 104730 ||| ||| | || || | | ||| | ||| | ||| | |||||||| ||| | Sbjct 12028 CCACGGTAAAGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTT 11969 Query 104731 CTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCAC 104789 || ||| | ||||||||| | | || ||||| || |||| | || || ||| ||| Sbjct 11968 ATTTATGGAAAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAG-CAC 11910 Query 104790 CTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG 104849 ||||| | |||| ||||| || || ||| | || || || || || || Sbjct 11909 CTGGTTTGAGTGATGTATATGGTGATGAATTCAAAGAATTATATACCAAATATGAAAGAG 11850 Query 104850 AAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTC 104909 ||||| | | | || | ||| | | ||| | | || | | ||| Sbjct 11849 AAGGTAGAGGCAGGAGAACAATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTC 11790 Query 104910 AAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATC 104969 |||| || ||||||||||| | |||| | || || || || |||||| | || ||||| Sbjct 11789 AAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATCTAATC 11730 Query 104970 AAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG 105029 || | ||||||||||| ||||| ||||||| | || ||||| | |||| | || Sbjct 11729 AACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATATTCAT 11670 Query 105030 ACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATC 105089 || || || || || ||||| | || | || | || | ||| || Sbjct 11669 CACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGTTGAAA 11610 Query 105090 CAGA-GACAAAGACATTTGAT-----TATGAAAAACTCCACGAAGTTACGAAAACTGTCA 105143 || ||||| || ||| | | ||| || | || ||| |||| || ||| | Sbjct 11609 GTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAAGGTTGTGA 11550 Query 105144 CCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAAT 105203 | |||||| | || | | | || |||||||| | || || ||||| ||||| | | || Sbjct 11549 CTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGCAAGAAGAT 11490 Query 105204 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTC 105263 | ||||||||| || | ||||||| | | ||||| || ||| | || |||| ||||| Sbjct 11489 CAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGCCTTCATGA 11430 Query 105264 T-TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAG 105322 | ||| || |||||||||| ||||| |||||| | ||| | || ||||| Sbjct 11429 TGTTGAGATTAC-CATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAATTTTTGAA 11371 Query 105323 ACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAG--AGGTTGATGGTCCAT 105380 ||||| ||||| || ||| | ||||| ||| || || | ||| ||||| |||| Sbjct 11370 ACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCCATTAGG--GATGGACCAT 11313 Query 105381 ATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG--A 105438 |||| || ||||| || ||||| || || ||||| | || || |||||| | |||| | Sbjct 11312 ATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTTTGGGGTA 11253 Query 105439 AGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGG 105498 || | | | | ||| || |||||||| | | ||||| ||||||| || || Sbjct 11252 AGAAGCCAACCAACTTA--TATGACTGGGATTCATTAAAGGAGAAAATCAAGGCCAATGG 11195 Query 105499 TCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 105558 | | | || | || | || |||||||| || || || || | ||||| | || Sbjct 11194 TTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTCAAATTCTAGG 11135 Query 105559 TAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGG 105617 | | || |||||||||||||| ||||| | || || || ||| |||||| | || | Sbjct 11134 TTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCT-AGAAGAGTTTTAGCCG 11076 Query 105618 GAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGT 105677 | || || |||||| ||| || | || || | || || || |||||| Sbjct 11075 GTGAATTCCAGATTGTTAACCCTTATATGTTGAGAGATTTAGTTGAAATGGGACTCTGG- 11017 Query 105678 CCAAGGA---TATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGG 105734 || || |||||| | | || | || |||||| ||||| || | | Sbjct 11016 --AATGATTCTATGAAAAACCATATCATCTCAGATAATGGTTCGATTCAGAACTTACCGA 10959 Query 105735 ATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATG 105794 ||||||| | || || ||| | || || || || ||||| ||| | ||| Sbjct 10958 ATATTCCTCAAGAGATCAAGGACTTATATAAGACTGTCTGGGAGATCTCGCAAAAGACAA 10899 Query 105795 TCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCT 105854 | || || ||||| || ||| | ||| | | | ||||| ||| |||||| || Sbjct 10898 TTATCGATATGGCTGCTGATAGAGGTGCATACGTGGATCAGTCACAATCTATGAACATCC 10839 Query 105855 TCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGG 105914 || ||| |||||| ||| || | | || ||||| | || |||||||||||| Sbjct 10838 ATTTGAAAAATCCAACAATGGGTAAATTAACGTCCATGCATTTCTATGGTTGGAAGAAGG 10779 Query 105915 GTCTCAAAACGGGGATGTATTACCT 105939 | |||| || || ||||||||||| Sbjct 10778 GGATCAAGACAGGTATGTATTACCT 10754 >seq122 Length=40810 Score = 95.1 bits (104), Expect = 1e-14 Identities = 339/515 (66%), Gaps = 20/515 (4%) Strand=Plus/Minus Query 94730 AAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTG-ATACAAAG 94788 ||||| | || ||||| | | || || || ||||| | || ||| ||| | | |||| Sbjct 14996 AAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCCTTAAAATGGATTGCAGATAAAG 14937 Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848 ||||| ||||| ||| | | | |||||||| |||||| ||||| ||||||||| Sbjct 14936 ATGCGTTG-TTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCT 14878 Query 94849 GGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907 ||||| || ||| | || | ||| | || ||| ||||| | ||||||||| | || Sbjct 14877 GGTTCATT-TGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTT 14819 Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTT 94965 |||||||||||| || | | | || || || | || || ||||| | | | ||| Sbjct 14818 CTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTT 14759 Query 94966 TTCAAATTATTGCGTATTAAACCA-ACGACTGAGACTATTCATTC-TATTGTTAAGGAAG 95023 |||| || ||| || ||| |||| | | | ||| | || ||| |||| Sbjct 14758 TTCACAT--TTGAACCATACCCCAGACGA--AAAAATTGTCAGACAAATCATTACCGAAG 14703 Query 95024 CCGTTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGA 95083 ||||||| ||||| || || | | || ||||| || | | ||||||||| Sbjct 14702 CCGTTGATATTGAAAAGAAATACTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGA 14643 Query 95084 ATTCTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGA-AGCAGATC 95142 || || |||| | | ||| | |||| ||| | |||||| | ||| || || Sbjct 14642 ATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTTGCAGATAGACTACTGATTGC--ATT 14585 Query 95143 GGGGTGCCTCCAA---TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGC 95199 || || | || | | || | |||||||| ||||| |||||||||||| | Sbjct 14584 AGGTTG--TGAAAAGGTATACGACGTTACAAATCCATTCGACTTTATGGAGAACATTTCC 14527 Query 95200 CTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGT 95234 || | || || |||||||| ||||||||||| || Sbjct 14526 CTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGT 14492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255922481560