Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01]
669 sequences; 10,176,019 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq509 136 5e-27
seq572 127 2e-24
seq122 98.7 1e-15
>seq509
Length=17948
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | || || ||||||||||| | || || |||||| |
Sbjct 2112 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 2053
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| ||||||| || |||||||| || ||||| || |||||
Sbjct 2052 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 1993
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| ||||||||| | || |||| | | || | | ||||| ||
Sbjct 1992 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 1933
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||| |||||||| ||||||||
Sbjct 1932 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTG 1900
>seq572
Length=74374
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| | ||||| ||||| ||||| | || ||||| || |
Sbjct 55839 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 55780
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| || || || || ||||| || ||||| || |||||
Sbjct 55779 GACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAA 55720
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| ||||||||| | || |||| | | || || | ||||| ||
Sbjct 55719 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAAC 55660
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| || ||||| | ||||||
Sbjct 55659 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTG 55627
>seq122
Length=40810
Score = 98.7 bits (108), Expect = 1e-15
Identities = 286/428 (67%), Gaps = 18/428 (4%)
Strand=Plus/Minus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785
|| ||||| ||| ||||| |||||||| ||||| ||||| || || |||||| |
Sbjct 14910 GCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTG 14851
Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845
|||||| | || ||||||||||| || |||| || ||||||||||| | | | || ||
Sbjct 14850 AAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAA 14791
Query 64846 GGGCTCCACCAAGAATTTGC--GGTTACCCTGTTCAGCCACCTCAAGGACAAACCATCAC 64903
|| | || || ||||| | || | || |||| || | || || ||| ||
Sbjct 14790 GGTTTACATACCGATTTTGCTTGTTTGCTCTTTTCA--CATTTGAA--CCATACC-CCAG 14736
Query 64904 ATGGGACTATAAT-TGATATAGTAAAATCG--GCTGTAGAAATTGAAAAGGAATTCATTA 64960
| | | || | || | | | | || || || || ||||||||| ||| | | |
Sbjct 14735 ACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAAATACTTCA 14676
Query 64961 CTGCCGCGCTTCCGTGTCGTC-TCATCGGCATGGATGCCGATAAGATGAAACAGTATATC 65019
||| ||| || || |||| | | |||| ||| || ||| |||| |||||| ||
Sbjct 14675 CTGACGCCCTACC-TGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTC 14617
Query 65020 GAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATT---AAGCCCTACTGGAATTCT 65076
|| ||||| |||||| | || || | | || ||| | ||| ||| || | |
Sbjct 14616 GAGTTTGTTGCAGATAGACTACTGATTGCATTAGGTTGTGAAAAGGTATAC--GACGT-T 14560
Query 65077 TCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAA 65136
|||||||||| |||| ||||||| || ||| | || || || |||||||| |||
Sbjct 14559 ACAAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAA 14500
Query 65137 AAGAGGGT 65144
||||| ||
Sbjct 14499 AAGAGAGT 14492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570305630779280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |