Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq509 136 5e-27 seq572 127 2e-24 seq122 98.7 1e-15 >seq509 Length=17948 Score = 136 bits (150), Expect = 5e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || ||||||||||| | || || |||||| | Sbjct 2112 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 2053 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| ||||||| || |||||||| || ||||| || ||||| Sbjct 2052 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 1993 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || ||||| ||||||||| | || |||| | | || | | ||||| || Sbjct 1992 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 1933 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | ||||||||||| |||||||| |||||||| Sbjct 1932 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTG 1900 >seq572 Length=74374 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| | ||||| ||||| ||||| | || ||||| || | Sbjct 55839 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 55780 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| || || || || ||||| || ||||| || ||||| Sbjct 55779 GACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAA 55720 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || ||||| ||||||||| | || |||| | | || || | ||||| || Sbjct 55719 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAAC 55660 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||| || ||||| | |||||| Sbjct 55659 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTG 55627 >seq122 Length=40810 Score = 98.7 bits (108), Expect = 1e-15 Identities = 286/428 (67%), Gaps = 18/428 (4%) Strand=Plus/Minus Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785 || ||||| ||| ||||| |||||||| ||||| ||||| || || |||||| | Sbjct 14910 GCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTG 14851 Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845 |||||| | || ||||||||||| || |||| || ||||||||||| | | | || || Sbjct 14850 AAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAA 14791 Query 64846 GGGCTCCACCAAGAATTTGC--GGTTACCCTGTTCAGCCACCTCAAGGACAAACCATCAC 64903 || | || || ||||| | || | || |||| || | || || ||| || Sbjct 14790 GGTTTACATACCGATTTTGCTTGTTTGCTCTTTTCA--CATTTGAA--CCATACC-CCAG 14736 Query 64904 ATGGGACTATAAT-TGATATAGTAAAATCG--GCTGTAGAAATTGAAAAGGAATTCATTA 64960 | | | || | || | | | | || || || || ||||||||| ||| | | | Sbjct 14735 ACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAAATACTTCA 14676 Query 64961 CTGCCGCGCTTCCGTGTCGTC-TCATCGGCATGGATGCCGATAAGATGAAACAGTATATC 65019 ||| ||| || || |||| | | |||| ||| || ||| |||| |||||| || Sbjct 14675 CTGACGCCCTACC-TGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTC 14617 Query 65020 GAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATT---AAGCCCTACTGGAATTCT 65076 || ||||| |||||| | || || | | || ||| | ||| ||| || | | Sbjct 14616 GAGTTTGTTGCAGATAGACTACTGATTGCATTAGGTTGTGAAAAGGTATAC--GACGT-T 14560 Query 65077 TCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAA 65136 |||||||||| |||| ||||||| || ||| | || || || |||||||| ||| Sbjct 14559 ACAAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAA 14500 Query 65137 AAGAGGGT 65144 ||||| || Sbjct 14499 AAGAGAGT 14492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570305630779280