Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq546 508 8e-139 seq122 244 1e-59 seq221 102 1e-16 >seq546 Length=22432 Score = 508 bits (562), Expect = 8e-139 Identities = 1388/2100 (66%), Gaps = 47/2100 (2%) Strand=Plus/Plus Query 76818 AGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGT 76877 || || |||||||| || || | ||| |||| || |||||||||||| || | | Sbjct 10754 AGGTAATACATACCTGTCTTGATCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 10813 Query 76878 TTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCT 76937 || | |||| | ||| || ||||| || || ||||| | | | || Sbjct 10814 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 10873 Query 76938 CCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAA 76997 ||||||||||| ||||| | ||||| |||||||| | || ||||| | ||| || | Sbjct 10874 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 10933 Query 76998 ACTTGTTTGATATCATCTGGAAGGTTTG-TA--TTTTGAATGGAACCACCATCTGATATA 77054 | | ||||| || | |||| || | || || ||||| |||||| |||||| || Sbjct 10934 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 10993 Query 77055 ATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGA 77114 || || || ||| ||||||||| | | | | || |||| |||| | | || | Sbjct 10994 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAA 11053 Query 77115 GGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATAT 77174 || ||||| || || ||||| || | || ||||| | || ||||||||| || || Sbjct 11054 GGGTTAACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 11113 Query 77175 GGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCC 77234 ||||| | |||| |||| || | |||||||| || |||||||| ||||| ||||| Sbjct 11114 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 11173 Query 77235 ACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCC 77294 || | || |||||| | ||||| | ||||||| || |||| | | ||| || Sbjct 11174 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 11233 Query 77295 CAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT 77354 | | | | || | |||||||||| | ||||| | || | ||| Sbjct 11234 TATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGA 11293 Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 ||||| | | | || ||||| ||||| || | | || |||| ||| || ||||| Sbjct 11294 GATCCTTCAAAAGTCTCATATGGTCCATCCCTAATGGATAATTCAACACTTGCCTCCAAA 11353 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 || | | |||||| ||||| ||||| | |||| || || | |||||| |||| Sbjct 11354 GCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCA 11413 Query 77475 AACGGATAATGTAAA-AGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 || || |||| | || | || ||||||||||| || || || || |||| | |||| || Sbjct 11414 AATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGG 11472 Query 77534 TCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAAT 77593 ||| | |||| |||| || || | || | || |||||| || || | || || || Sbjct 11473 TCTGTTTCTCATATTTGATCTTCTTGCAGTTTCAACAGGATAGTAGTTTCTATCGATGAT 11532 Query 77594 TTTATTGAGATTTCTA---ACAACTACTTTAAC--CACGTCCTTT-----AGTTTAAGAA 77643 |||||| | ||| || ||||| | ||| || || || |||| | | Sbjct 11533 TTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCA 11592 Query 77644 AATCAAATCTTC-CATCTAT---AACAAA--CATGTTCAAAGCTATAGATGCTAGATTAC 77697 | || |||| |||| | |||||| || | ||| || | | |||| ||||| Sbjct 11593 A--CAGTTCTTGTCATCACTTTCAACAAATGCAGG--CAATGCAACACTAGCTAAATTAC 11648 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 |||||||| || | || | ||||| | || || |||| ||| | ||| Sbjct 11649 AAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATT 11708 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAA 77817 ||||| |||| ||||||||| || || || || |||| |||||||| | || | Sbjct 11709 TGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGA 11768 Query 77818 ACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG--CTTT 77875 | || || || |||||| | || | ||| | || || | ||| | ||| | | |||| Sbjct 11769 AAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATA--ACTTTTGTGCTTT 11826 Query 77876 TATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATC 77935 || | || || | ||||||||||||| ||||||| || |||||||| Sbjct 11827 AATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATC 11886 Query 77936 TCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATC 77995 || | |||||| ||| ||||| |||| | ||| | | || | ||| || ||| Sbjct 11887 ACCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATT 11946 Query 77996 TTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGT 78055 || || ||||| || |||||| | |||||| ||||||| |||| |||| ||||| | Sbjct 11947 TTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGC 12006 Query 78056 TCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATG 78115 |||| |||||| || || || || | | ||| | ||| || | |||||| ||||| Sbjct 12007 TCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATG 12066 Query 78116 CCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATA 78175 ||| || || | ||||| ||| | | ||||||| ||||||||| || || || | ||| Sbjct 12067 CCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATA 12126 Query 78176 TCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGT 78235 || || ||||||||| | || || | |||||||||||| || || ||||| ||||| || Sbjct 12127 CCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGT 12186 Query 78236 TCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGC 78295 || | ||||||| ||| ||| | ||||||| || || ||| || || || || Sbjct 12187 ACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGC 12246 Query 78296 CATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATC 78355 | || || || | ||| || |||||| ||||| |||||||| || || || || Sbjct 12247 AGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTC 12306 Query 78356 CATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAA 78415 | |||| || | ||||| ||||||||||| ||| || | ||| || | Sbjct 12307 CTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAG 12366 Query 78416 TGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGA 78475 || ||||| ||||| || || | | | || | | ||| || ||||||||| | || Sbjct 12367 AGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGA 12426 Query 78476 TTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535 || || || |||||| || || || || | ||| | | ||| || || ||||| Sbjct 12427 ATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTC 12486 Query 78536 AACCGTCTTATTATTTATTTTCAACAAGTATGATT--TTTCCAAAGTTTTAAAACCAAAA 78593 | ||||| ||||||| | || ||| || | | |||| || ||||| ||||||||| Sbjct 12487 GGCAATCTTACCATTTATTCTTAA-AAG-ATAACTCCTTTCTAATGTTTTGAAACCAAAA 12544 Query 78594 TAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTAT---CTTTGTAT 78650 ||||| || |||||||| || ||| ||| || || || | ||| | || | | Sbjct 12545 TAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCGCATT-TTT 12603 Query 78651 TTGGTAACAATAT-CCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGG 78709 |||| ||||| | ||| | | ||||||| || |||| || |||||||||||| Sbjct 12604 TTGG--ACAATTTCCCAAGTC-TCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGG 12660 Query 78710 ATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTG 78769 || || ||| || ||| | | | || ||| ||| || |||||| ||| || Sbjct 12661 ATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTG 12720 Query 78770 TAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG--TTG-TGTAGT 78826 || || || | || | ||| ||||| | | |||||||| ||||| | | ||| | Sbjct 12721 TAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCAT 12780 Query 78827 ACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATA 78886 | || || || |||| || |||||| ||||||| || | |||||| || |||| ||| Sbjct 12781 ATAA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 12837 >seq122 Length=40810 Score = 244 bits (270), Expect = 1e-59 Identities = 578/866 (67%), Gaps = 18/866 (2%) Strand=Plus/Plus Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930 || |||||||| || ||||| || | | || || || |||||||| || |||||||| Sbjct 14498 TTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAATGGATTT 14557 Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGT---CTATCTGCAACGAAT 47987 | | || | |||| | | |||||| | ||||||| ||||||||||| || Sbjct 14558 GTAACGTCGTATACCTTTTCACAACCTAATGC---AATCAGTAGTCTATCTGCAACAAAC 14614 Query 47988 TCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCC 48047 || | ||| ||||| || |||||| || | | || || ||||| || || Sbjct 14615 TCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCGTCA 14674 Query 48048 GT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTC 48106 || ||| | |||| ||| ||| || || || || || | | || ||| || Sbjct 14675 GTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTTTC 14733 Query 48107 ACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTC 48166 ||| | || ||||||| ||| | ||||| |||||||| ||| | |||||| Sbjct 14734 GTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAACCTTC 14793 Query 48167 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAG 48226 |||||||| ||| | ||||| || || || | ||| ||||| | || | ||||| | Sbjct 14794 ATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAA 14853 Query 48227 CCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGT 48286 ||| || || | || || || ||||| ||||| || ||||| || || |||||||| Sbjct 14854 CCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCAC 14913 Query 48287 AAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTT 48343 | |||||| | | || || || | | ||||| | ||||| || ||||| Sbjct 14914 CAACCTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGGCCTT 14973 Query 48344 CTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATC 48403 | ||| | ||| || |||||||| || ||||| || | || | |||| || ||| Sbjct 14974 TTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTGGATC 15033 Query 48404 TTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCAT 48463 ||| | ||||||||| || || | | ||| |||| || ||||| ||||| || || Sbjct 15034 TTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCATAAT 15093 Query 48464 CTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGT--ACAAAATCGTTCA 48521 || || || || |||||| | || |||| || || || || | | ||| || ||| Sbjct 15094 TTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTC--TCA 15151 Query 48522 GCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATA 48581 | ||||| ||||| ||||| |||||| ||||||||| || |||| || | ||| Sbjct 15152 ACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATG 15211 Query 48582 AAATATTTTTCGTTGGAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCT 48638 || || |||| || ||| | || ||||| |||| | |||||| || | ||| Sbjct 15212 AAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCA 15271 Query 48639 ACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTG 48698 | ||| || || ||||| || ||||| ||||| || || ||||| | ||| || || Sbjct 15272 ATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGA 15331 Query 48699 TATTGGATTGGGAAAATAACAAATCT 48724 || | |||||| || | |||||| || Sbjct 15332 TACTTGATTGGAAAGAGAACAAACCT 15357 >seq221 Length=25365 Score = 102 bits (112), Expect = 1e-16 Identities = 180/260 (69%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 ||| || | ||| || ||||||||||||||||||| ||||| | ||| |||||| || Sbjct 17825 CATGAACATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTT 17884 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || |||||| | | || |||||| || | || |||| ||||||||| |||| ||| Sbjct 17885 CCCATGATTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATA 17944 Query 78131 TATTGCCATA-ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189 || ||| | | | || |||| ||| || || ||||| || | |||| || || || Sbjct 17945 TA-TGCAAAATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAAT 18003 Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAAC 78249 | | ||| | ||||| || || | |||| || | ||||| | || || ||| Sbjct 18004 TGAATACTTTTAACATAGGGATTAAACCGGATGAAATCCCATTACTACCGTTGATGTAAG 18063 Query 78250 TTCCACTTGCGCGAATATTA 78269 | ||||| || | |||||| Sbjct 18064 TACCACTGGCTCTTATATTA 18083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694662990832160