Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq509 145 2e-29 seq572 140 7e-28 seq149 91.5 3e-13 >seq509 Length=17948 Score = 145 bits (160), Expect = 2e-29 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||||||||||| | || | ||||| |||| ||| || || ||||| Sbjct 1921 TTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 1980 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||||||| |||||||| |||||||||||||| || | || || | Sbjct 1981 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATT 2040 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||||||||| || | |||||||| | || || |||||||| || ||||| ||||| Sbjct 2041 GTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAAC 2100 Query 283088 GAATATCTGCATTTT 283102 || || ||||| || Sbjct 2101 AAAAATTTGCATCTT 2115 >seq572 Length=74374 Score = 140 bits (154), Expect = 7e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | | || | ||||| |||| ||| || || ||||| Sbjct 55648 TTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 55707 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||||||| |||||||| ||||| |||||||||||| || || | Sbjct 55708 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATT 55767 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| |||| ||| ||||| | || || |||||||| || || ||||| || Sbjct 55768 GTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGAC 55827 Query 283088 GAATATCTGCATTTT 283102 || || ||||| || Sbjct 55828 AAAAATTTGCATCTT 55842 >seq149 Length=23196 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 || || ||||| | |||||||| |||| || ||||| | || ||||| ||||||||| Sbjct 1725 GGAAAACCTTCAACTTGACCGTTAGCAATAGCTCTCATTAAGGTGGACTTACCAGCACCA 1666 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148 || || || || | |||||| | | || |||| || | || | || ||||| | Sbjct 1665 TTTGGACCACATAAACCATATCTTCTACCTCTCTTTAGTCTTAATTGAGTCTTGTTTAAC 1606 Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | ||||||| ||||||| || || ||||| ||||| | ||| | ||| || || Sbjct 1605 AAAATCTTAGCACCATAAGCAAGGGAGAATTCACAGTTACATAAGTCTTCACC 1553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046730227809526