Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F000787615.1_202014-11-01] 669 sequences; 10,176,019 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq122 334 8e-87 >seq122 Length=40810 Score = 334 bits (370), Expect = 8e-87 Identities = 587/849 (69%), Gaps = 7/849 (1%) Strand=Plus/Plus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 |||||||||| ||||| ||||| | | || || || |||||||| || |||||||| | Sbjct 14499 TTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAATGGATTTG 14558 Query 23300 AAGTATTATATACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAA 23359 | | ||||| || ||| |||| | | | || |||||||| ||||| || | Sbjct 14559 TAACGTCGTATACCTTTTCACAACCTAATGCAATCAGTAGTCTATCTGCAACAAACTCGA 14618 Query 23360 TATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATA 23419 ||| |||||||||||||| | || ||||| | | || || || | || ||| | Sbjct 14619 CATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGA 14678 Query 23420 AGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCACTAG 23479 || || |||||||| ||| || || |||| ||||| | || || ||| | Sbjct 14679 AGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTTTCGTCTG 14738 Query 23480 GTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCC 23539 | | || || |||| ||| | ||||| |||||||| ||||| |||||||| | Sbjct 14739 GGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAACCTTCATCTC 14798 Query 23540 TACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAA 23599 ||| ||||| || || || || || || |||||||| || |||| ||||| | ||| | Sbjct 14799 TACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGA 14858 Query 23600 ATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGAC 23659 | || | |||||||| || || ||||||||||| |||||||| ||||| ||||| | || Sbjct 14859 AGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCA-AC 14917 Query 23660 GTGTAC-CAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAAT 23718 | | |||| |||| | ||| | |||||||||| | ||| | ||||| Sbjct 14918 CTCTCTGCAAACAACGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGGCCTTTTCC 14977 Query 23719 TTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTT 23778 || | ||| |||||||||||||| || || | || |||| | |||| | Sbjct 14978 TTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTGGATCTTTG 15037 Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || || |||||||| | |||| ||| |||| |||||||| ||||| || ||| || Sbjct 15038 ATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGG 15097 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCA-TTAAAAAATCTTTTAGCTAA 23897 |||||||| |||||| |||| || | | |||||||||| || | |||| | | | |||| Sbjct 15098 AACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAAT-TCTCAACTAA 15156 Query 23898 ATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATG 23957 |||||| || || ||||||||| |||||||||||| || ||||| | || || Sbjct 15157 ATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAA 15216 Query 23958 TCTTTCA---TCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTC 24014 ||||||| || | || || |||||||||| | |||||| || | ||||| ||| Sbjct 15217 TCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTC 15276 Query 24015 ATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTG 24074 || | ||||| ||| ||| || ||| |||||| ||||||| || | || | Sbjct 15277 CTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTT 15336 Query 24075 TATTGGAAA 24083 |||||||| Sbjct 15337 GATTGGAAA 15345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521483639056600