Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 306 4e-78
seq5022 197 2e-45
>seq4829
Length=1098
Score = 306 bits (338), Expect = 4e-78
Identities = 571/833 (69%), Gaps = 12/833 (1%)
Strand=Plus/Minus
Query 23895 GATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAAT 23954
|| || || ||||| || ||| ||||||| ||||| | || | ||| | | || |||
Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014
Query 23955 TCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATT 24014
|| | | ||||||||| |||||||| | ||| ||||| || ||||||
Sbjct 1013 GCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATA 954
Query 24015 CCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTC 24073
|| | | || || || || || |||| ||| | |||| ||||||| || || ||
Sbjct 953 CCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTC 895
Query 24074 TGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAA 24133
|| || || ||| || ||| ||| || | || |||||| ||| | |||
Sbjct 894 GGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAA 835
Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193
||| || |||||| |||| ||| || ||||||| ||| | |||||||| ||||| |
Sbjct 834 ACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAA 775
Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253
|| ||||| | || | |||||| | ||| || ||||| |||||||| ||||| |||||
Sbjct 774 ACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAA 715
Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT-- 24311
||| ||||| || || ||||| || | | || ||| || | || | || |
Sbjct 714 AATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGC 655
Query 24312 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370
||||| ||| |||||| |||||||| | || | ||| || ||||| || || |||||
Sbjct 654 AATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATT 595
Query 24371 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 24430
|| | | | |||| || |||||| | || ||||||||||| | | ||| |
Sbjct 594 GAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGT 535
Query 24431 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 24490
|||||||||||||||||| || ||||| || || ||||||||| ||||||| | |||
Sbjct 534 TTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAAT 475
Query 24491 CTGTACTTCTAT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 24548
|| || || | | ||| || || ||||||||||||| ||||| || ||| ||
Sbjct 474 TTGAACATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCA 417
Query 24549 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTC 24605
||||| ||||| | || | || || || |||| | | | | | || |||
Sbjct 416 GCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTC 357
Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665
||||||| | |||||| || | ||| | ||| ||| | ||||| || ||||| ||||||
Sbjct 356 CAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCC 297
Query 24666 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718
|| || ||||| | ||| || || ||||| | |||||||| | |||||| ||
Sbjct 296 TTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244
>seq5022
Length=2556
Score = 197 bits (218), Expect = 2e-45
Identities = 713/1102 (65%), Gaps = 31/1102 (3%)
Strand=Plus/Minus
Query 52801 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 52860
||| | |||||||||||| | || | || | | || | || || ||||| || ||
Sbjct 2184 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 2125
Query 52861 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATC 52920
|| || || |||| || || |||||||| |||| ||| | ||||
Sbjct 2124 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 2065
Query 52921 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 52980
| | |||||| ||||||||||| ||||| | | | || || || || ||||||||
Sbjct 2064 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 2005
Query 52981 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 53039
| || || |||||||| | || ||||| | ||| ||||| || || ||| || ||||
Sbjct 2004 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 1946
Query 53040 CTGGAAGGTTTG-TA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCT 53096
|||| || | || |||||||| || ||| |||| || || || || ||
Sbjct 1945 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 1886
Query 53097 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 53156
||||||||| | | | || |||| |||| | | || || || || | || |
Sbjct 1885 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 1826
Query 53157 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 53216
|||| || | || ||||| | || ||||||||| || || ||||| | | || |
Sbjct 1825 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 1766
Query 53217 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 53276
| | || | |||||||| ||||| ||||||||||| ||||| || | || |||||
Sbjct 1765 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 1706
Query 53277 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 53334
| | ||| | | ||||||| || |||| | ||||| | | | | | ||
Sbjct 1705 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 1646
Query 53335 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 53394
| || ||||| | ||| | || |||||| || | ||
Sbjct 1645 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 1588
Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454
|| |||||||| ||| | || || |||| ||| ||||| || ||| | | ||||||
Sbjct 1587 CTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 1528
Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT-TTA 53513
|||||| || || | |||| || || | |||||| | ||||||||| |||| | |
Sbjct 1527 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 1469
Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573
| | || || || ||||| || ||||| ||||||| | | || ||||| | |||| |||
Sbjct 1468 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 1409
Query 53574 TAGA---GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGT 53630
| || || ||| ||| || |||||| || || |||| || |||||||| | ||
Sbjct 1408 TTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 1352
Query 53631 TTCT-GACAATTACTTTG--ACCACAT---CCTTC----AGTTTGAGAAAATCAAATTGT 53680
|| | | || ||||| | ||| |||| |||| | || ||||
Sbjct 1351 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTTGT 1292
Query 53681 CCATCTATTACAA-ACATG--TTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCA 53737
|||| || ||| | ||| |||||||| | || | ||||||||| ||| ||
Sbjct 1291 -CATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCC 1233
Query 53738 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 53797
| || | ||||| | || ||| ||| | ||| | | ||||| || |||
Sbjct 1232 TCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAA 1173
Query 53798 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTT 53857
|||||||||||| || |||||||| ||||||||||| | ||||| || |||||||||
Sbjct 1172 TTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTT 1113
Query 53858 TCAATCTGGGATTCTATAATCG 53879
||| | || | ||||| ||||
Sbjct 1112 TCAGTTTGAGCTTCTAAGATCG 1091
Score = 196 bits (216), Expect = 6e-45
Identities = 519/788 (66%), Gaps = 10/788 (1%)
Strand=Plus/Minus
Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTC--CAGGCCGTTTGTTTCCT 54187
|||||| |||||||| || || | ||||| || ||| | |||| | ||| || ||
Sbjct 924 AATATCTGAATGCCAAGGCTCAA--TATATAGTGCAAACGCACCAGGTCTTTTATTACCA 867
Query 54188 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 54247
|| || || | || || || ||||||||| | || || | |||||||||||| ||||||
Sbjct 866 CCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTG 807
Query 54248 GATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 54307
|||| |||||| || |||| ||||| ||| | | | ||||||| || ||
Sbjct 806 GATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAAC 747
Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 54367
|| || || || || |||| || || || || ||| ||| || ||||||||||| ||
Sbjct 746 CCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCT 687
Query 54368 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 54427
|| || ||| ||| |||| || || ||||| ||||||||| | | |||
Sbjct 686 TCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTA 627
Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487
|||| ||| || | || |||||||| || || || | | | || | | ||| ||
Sbjct 626 CCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAA 567
Query 54488 GTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 54547
|| || ||| | || || ||||| |||||| || || || || | ||||| |
Sbjct 566 GTTTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAA 507
Query 54548 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTT 54607
|| || || ||||| | ||||| |||||| | | | || |||| || |||
Sbjct 506 TGTTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTT 447
Query 54608 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTA 54667
|| |||||||||||||| || ||||||| || ||| ||| | | | | ||
Sbjct 446 TTGAAACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATA 387
Query 54668 TCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCA 54727
| | || ||| | || | ||| || ||||||| || |||| | |||| |||
Sbjct 386 TTCGCATTTTTTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCA 327
Query 54728 TTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTT 54787
|||||||||| | ||| || ||| | || | |||||| ||| || |||||
Sbjct 326 TTTTTAGGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTT 267
Query 54788 TCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG--TT 54845
| || |||| ||||| | || | |||||| || | | |||||||| ||||| |
Sbjct 266 TGCTTTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATA 207
Query 54846 G-TGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACT 54904
| ||| || || || || |||| || | | | | || ||||| || ||||| ||
Sbjct 206 GTTGTCATATAA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACA 150
Query 54905 CCATTATA 54912
|||| |||
Sbjct 149 CCATCATA 142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593678644242240
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