Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq4829 273 2e-68 >seq4829 Length=1098 Score = 273 bits (302), Expect = 2e-68 Identities = 573/840 (68%), Gaps = 27/840 (3%) Strand=Plus/Minus Query 15995 GAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTAT---TTATCGCATCCC 16051 ||||| || |||||||| || || |||||| | ||| | |||| || || || || Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGT--AACG-TCGTATACCTTTTCACAACCT 1017 Query 16052 AATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTC 16111 ||| | | || || |||||| || ||||| || | |||||| ||| ||||| ||| Sbjct 1016 AATGCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTC 957 Query 16112 ATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCT 16171 || || | || || ||||| | || || || || | | ||||| |||| ||| ||| Sbjct 956 ATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGGCT 897 Query 16172 TCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTAAT--AAGTGTTTAAACA 16229 || | || || | ||| || | | || | | |||| | | || ||| ||| | Sbjct 896 TCGGTAATGATTTGTCTGACAATTTT-TTCGTCTG-GGGTATGGTTCAAATGTGAAAAGA 839 Query 16230 TTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATG 16289 | |||||||||||| ||| || ||||| || |||| || | |||||| || || | Sbjct 838 GCAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACG 779 Query 16290 TAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAA 16349 | | ||||||||| | |||| ||||| | ||| || || | |||||||||||||| | Sbjct 778 TCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGA 719 Query 16350 AGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttac 16409 |||| ||||||||||| || |||||||| ||||| | ||| | || | || |||| Sbjct 718 AGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTAT 659 Query 16410 tttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTG 16469 | | ||||||||| |||||| | || |||| || | ||| || | || |||| Sbjct 658 CTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTG 599 Query 16470 CATTAAATAAATAAtt--tttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACT 16527 |||| ||| || |||| ||| ||||| |||| || |||||||| || | |||| Sbjct 598 CATTGAAT-AAGAATTCACTTTCCTTTG-GATCTTTGATGTAAGTATCAATCAATAAAGA 541 Query 16528 ATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTC 16587 ||| |||| |||||||| || ||||| || || || ||||| || ||| |||| || Sbjct 540 ATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTC 481 Query 16588 GGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCT 16647 | ||||| || ||| | || | || |||| ||||| || ||||| ||||| Sbjct 480 TGGAATTTGAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGA 421 Query 16648 AGCTGCAAAAAACGCAAGTA----TGTGTTTAATAAAAttt--ttttCGTT--ATCTGAA 16699 ||| ||||| ||||| || | || | || || ||| |||||||| |||| | Sbjct 420 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCT-AT 362 Query 16700 AGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAA 16759 ||| ||| ||| |||||||| || | ||| | || || ||||||| ||||| Sbjct 361 TGTT----CCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGAT 306 Query 16760 GCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATAC 16819 || | ||||| || ||||||| ||| || || | || || ||||| | |||| || Sbjct 305 GCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAAC 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462478537256800