Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 273 2e-68
>seq4829
Length=1098
Score = 273 bits (302), Expect = 2e-68
Identities = 573/840 (68%), Gaps = 27/840 (3%)
Strand=Plus/Minus
Query 15995 GAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTAT---TTATCGCATCCC 16051
||||| || |||||||| || || |||||| | ||| | |||| || || || ||
Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGT--AACG-TCGTATACCTTTTCACAACCT 1017
Query 16052 AATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTC 16111
||| | | || || |||||| || ||||| || | |||||| ||| ||||| |||
Sbjct 1016 AATGCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTC 957
Query 16112 ATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCT 16171
|| || | || || ||||| | || || || || | | ||||| |||| ||| |||
Sbjct 956 ATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGGCT 897
Query 16172 TCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTAAT--AAGTGTTTAAACA 16229
|| | || || | ||| || | | || | | |||| | | || ||| ||| |
Sbjct 896 TCGGTAATGATTTGTCTGACAATTTT-TTCGTCTG-GGGTATGGTTCAAATGTGAAAAGA 839
Query 16230 TTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATG 16289
| |||||||||||| ||| || ||||| || |||| || | |||||| || || |
Sbjct 838 GCAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACG 779
Query 16290 TAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAA 16349
| | ||||||||| | |||| ||||| | ||| || || | |||||||||||||| |
Sbjct 778 TCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGA 719
Query 16350 AGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttac 16409
|||| ||||||||||| || |||||||| ||||| | ||| | || | || ||||
Sbjct 718 AGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTAT 659
Query 16410 tttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTG 16469
| | ||||||||| |||||| | || |||| || | ||| || | || ||||
Sbjct 658 CTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTG 599
Query 16470 CATTAAATAAATAAtt--tttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACT 16527
|||| ||| || |||| ||| ||||| |||| || |||||||| || | ||||
Sbjct 598 CATTGAAT-AAGAATTCACTTTCCTTTG-GATCTTTGATGTAAGTATCAATCAATAAAGA 541
Query 16528 ATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTC 16587
||| |||| |||||||| || ||||| || || || ||||| || ||| |||| ||
Sbjct 540 ATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTC 481
Query 16588 GGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCT 16647
| ||||| || ||| | || | || |||| ||||| || ||||| |||||
Sbjct 480 TGGAATTTGAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGA 421
Query 16648 AGCTGCAAAAAACGCAAGTA----TGTGTTTAATAAAAttt--ttttCGTT--ATCTGAA 16699
||| ||||| ||||| || | || | || || ||| |||||||| |||| |
Sbjct 420 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCT-AT 362
Query 16700 AGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAA 16759
||| ||| ||| |||||||| || | ||| | || || ||||||| |||||
Sbjct 361 TGTT----CCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGAT 306
Query 16760 GCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATAC 16819
|| | ||||| || ||||||| ||| || || | || || ||||| | |||| ||
Sbjct 305 GCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAAC 246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462478537256800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |