Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq4829 295 6e-75 >seq4829 Length=1098 Score = 295 bits (326), Expect = 6e-75 Identities = 579/843 (69%), Gaps = 21/843 (2%) Strand=Plus/Minus Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTT--GACATAAACACTTTATCACAAC 14018 || || || || |||||||| || ||||||||||| | | || || |||| ||||||| Sbjct 1076 AGGGAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATAC-CTTT-TCACAAC 1019 Query 14019 CTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAAT 14078 ||| | | | |||| |||||| |||| ||||| | ||| ||| |||| ||||| || Sbjct 1018 CTAATGCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTAT 959 Query 14079 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 14138 ||||||| | | || ||||| | | || || || ||||| ||| || | Sbjct 958 TCATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGG 899 Query 14139 CCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAA 14198 | ||| | || || | | ||||| | || | || || | |||| ||| | Sbjct 898 CTTCGGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGA 839 Query 14199 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 14258 ||||| |||||||| ||| | || |||||||||| ||| || ||||| || || | Sbjct 838 GCAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACG 779 Query 14259 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAA 14318 | || ||||||||||| |||| ||||| ||||| || || | || ||||| || || | Sbjct 778 TCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGA 719 Query 14319 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14378 |||| || || ||||| |||||||| || | || | ||| ||||| |||| | ||| | Sbjct 718 AGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTAT 659 Query 14379 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14438 | ||||||||| ||||||||| | |||| || ||| | ||||||||||| | Sbjct 658 CTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTG 599 Query 14439 CATTAAATAAATGTTC-CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14497 |||| ||||| ||| ||| |||| | ||| | |||| |||||||| | ||| | Sbjct 598 CATTGAATAAGAATTCACTTTCCTTTGGATCTTTGA-TGTAAGTATCAATCAATAAAGAA 540 Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557 || |||| || || ||||||||||| || || || ||||| |||||| |||| ||| Sbjct 539 TAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCT 480 Query 14558 GACCATTGTACCTC---TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCA 14614 | ||| || || |||| |||| | || | ||||||||||| |||||||||||| Sbjct 479 GGAATTTGAACATCACTTGAG--AAAT-TCTCAACTAAATTTTCATTGACTATACCATCA 423 Query 14615 CTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GCTGAGT 14671 ||| ||||| || || | | || ||| ||| || || |||||| | | | | Sbjct 422 GAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAAT--CT-TTCATTTTCGTTCAAT 366 Query 14672 ---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14728 || |||||||| ||||| || || ||||| | ||| || | ||||| ||| Sbjct 365 CTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGAT 306 Query 14729 GCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAAT 14788 || | || || || |||||| ||| ||||| | ||| || ||||| | ||||| Sbjct 305 GCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAAC 246 Query 14789 CTT 14791 ||| Sbjct 245 CTT 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482310702295840