Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4829 192 5e-44 seq5022 120 3e-22 seq730 93.3 4e-14 seq2706 87.8 2e-12 seq2598 87.8 2e-12 >seq4829 Length=1098 Score = 192 bits (212), Expect = 5e-44 Identities = 532/804 (66%), Gaps = 29/804 (4%) Strand=Plus/Plus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 || ||||||||||| | || || | || ||||| | ||||| || | |||| Sbjct 214 GAAGAACCACTTTTAAAGGAAAACAAGAGAAGGTTTGTTCTCTTTCCAATCAAGTATCAC 273 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || |||||| | |||||||| |||||||||||||| || ||||| | || ||| | || Sbjct 274 GAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTCTGGACTGCGGAGGAAATTGAT 333 Query 57627 CTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATT 57683 || || || ||| || |||||| || | || ||| ||| ||| || ||| Sbjct 334 CTCTCCAAAGATTTGCATGATTGGAACAATAGATTGAACGAAAATGAAAGATTCTTCATT 393 Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743 | || | ||||| || || || || |||||||| || || || ||||| || | Sbjct 394 TCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTG-- 451 Query 57744 AGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801 ||| |||| ||| || || ||| | | ||||| | ||| || || || || ||| | Sbjct 452 AGAATTTCTCAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTA 511 Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-- 57859 || |||||| | ||||| |||| ||||| || | || ||||| ||| | || || Sbjct 512 TGATGGAAAACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATC 571 Query 57860 CAACGACGAGAAACGTAGAC-TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGA 57918 ||| | || || | | | | ||||| || || |||||||| || ||| | | Sbjct 572 CAA--AGGA-AAGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAA 628 Query 57919 AGGCAGAGTGGTCAATCAAATGGAT-----AAAAAGCGCCACGGCCACGTTCGCCGAGAG 57973 |||| || ||| | | |||||||| | |||| || ||| || ||||| Sbjct 629 AGGCCGAATGGGCTTTAAAATGGATTGCAGATAAAG-----ATGCATTGTTTGCAGAGAG 683 Query 57974 GCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATT 58033 | | | || || || || || |||||||| ||||| || || ||||| | || || Sbjct 684 GTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTT 743 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 ||| |||| || | || ||||||| || ||||||| ||||||| |||| | | Sbjct 744 CTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAG 803 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC 58153 || || ||| | ||||| |||||||| || | | | | ||||||| | | ||| Sbjct 804 AGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCT--TTTCACATTTGAACCATACC 861 Query 58154 GACGCGGGATCGCATCTTGGAC--ATTATCACCGAGGCGGTCGCGATCGAAAATGAG-TT 58210 | | | | | ||| || || ||||| || || | || ||||| ||| | Sbjct 862 CCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAA-GAGATA 920 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270 |||| || |||||||| || | ||||||||||||| || |||||||||| |||| Sbjct 921 CTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTA 980 Query 58271 CATTGAGTTTGTTGCCGACAGACT 58294 | ||||||||||| || ||||| Sbjct 981 TGTCGAGTTTGTTGCAGATAGACT 1004 >seq5022 Length=2556 Score = 120 bits (132), Expect = 3e-22 Identities = 329/504 (65%), Gaps = 0/504 (0%) Strand=Plus/Minus Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514 |||||| ||||| | || | |||||||| || ||||| ||||| || || || || || Sbjct 915 ATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAAC 856 Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC 23574 || | || ||||| || | || || | ||| || | | || ||||| | || Sbjct 855 ATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATT 796 Query 23575 TACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC 23634 || || | | ||||| ||| || || || || | || || || || || || Sbjct 795 AGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACC 736 Query 23635 GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC 23694 | | ||| || |||| || |||| ||||| ||| || ||||| || || ||| || Sbjct 735 AGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATC 676 Query 23695 CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAA 23754 || || | || || |||||||| ||||||||||| | | || ||| | | ||| Sbjct 675 GTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAA 616 Query 23755 CAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC 23814 || || || || || || || || | || ||||| | ||| || || || || | Sbjct 615 AAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAAC 556 Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874 | |||||| || || || || ||||| | ||| || | ||| || | | ||| || || Sbjct 555 AGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCT 496 Query 23875 CTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934 ||| | | || || ||| | || ||||| | || | ||||| || ||||| Sbjct 495 TTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAA 436 Query 23935 ATAGTCATAGTTAAAGTCACGATC 23958 ||||| ||| || ||||| | ||| Sbjct 435 ATAGTTATAATTGAAGTCTCTATC 412 >seq730 Length=387 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| | || || || || || ||| | || |||||| | || Sbjct 1 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 60 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || | || || |||||||| | || || ||||| Sbjct 61 GACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAA 120 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || || || || || || ||||| || ||| | ||| || ||| Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAAC 180 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| || ||||| |||| | ||| |||| || |||| Sbjct 181 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTA 229 >seq2706 Length=450 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || ||| | || || || || || ||| | || || || | || Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | ||||| | ||| ||||||||||| | || || ||||| Sbjct 61 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 120 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || || || || || || ||||| || ||| || || || ||| Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 180 Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395 |||||||| ||||| |||||||| Sbjct 181 ATTCAAAAGGAATCTACTCTTCA 203 >seq2598 Length=450 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || ||| | || || || || || ||| | || || || | || Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | ||||| | ||| ||||||||||| | || || ||||| Sbjct 61 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 120 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || || || || || || ||||| || ||| || || || ||| Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 180 Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395 |||||||| ||||| |||||||| Sbjct 181 ATTCAAAAGGAATCTACTCTTCA 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445734148800960