Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 192 5e-44
seq5022 120 3e-22
seq730 93.3 4e-14
seq2706 87.8 2e-12
seq2598 87.8 2e-12
>seq4829
Length=1098
Score = 192 bits (212), Expect = 5e-44
Identities = 532/804 (66%), Gaps = 29/804 (4%)
Strand=Plus/Plus
Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566
|| ||||||||||| | || || | || ||||| | ||||| || | ||||
Sbjct 214 GAAGAACCACTTTTAAAGGAAAACAAGAGAAGGTTTGTTCTCTTTCCAATCAAGTATCAC 273
Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626
|| |||||| | |||||||| |||||||||||||| || ||||| | || ||| | ||
Sbjct 274 GAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTCTGGACTGCGGAGGAAATTGAT 333
Query 57627 CTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATT 57683
|| || || ||| || |||||| || | || ||| ||| ||| || |||
Sbjct 334 CTCTCCAAAGATTTGCATGATTGGAACAATAGATTGAACGAAAATGAAAGATTCTTCATT 393
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
| || | ||||| || || || || |||||||| || || || ||||| || |
Sbjct 394 TCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTG-- 451
Query 57744 AGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801
||| |||| ||| || || ||| | | ||||| | ||| || || || || ||| |
Sbjct 452 AGAATTTCTCAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTA 511
Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-- 57859
|| |||||| | ||||| |||| ||||| || | || ||||| ||| | || ||
Sbjct 512 TGATGGAAAACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATC 571
Query 57860 CAACGACGAGAAACGTAGAC-TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGA 57918
||| | || || | | | | ||||| || || |||||||| || ||| | |
Sbjct 572 CAA--AGGA-AAGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAA 628
Query 57919 AGGCAGAGTGGTCAATCAAATGGAT-----AAAAAGCGCCACGGCCACGTTCGCCGAGAG 57973
|||| || ||| | | |||||||| | |||| || ||| || |||||
Sbjct 629 AGGCCGAATGGGCTTTAAAATGGATTGCAGATAAAG-----ATGCATTGTTTGCAGAGAG 683
Query 57974 GCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATT 58033
| | | || || || || || |||||||| ||||| || || ||||| | || ||
Sbjct 684 GTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTT 743
Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093
||| |||| || | || ||||||| || ||||||| ||||||| |||| | |
Sbjct 744 CTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAG 803
Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC 58153
|| || ||| | ||||| |||||||| || | | | | ||||||| | | |||
Sbjct 804 AGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCT--TTTCACATTTGAACCATACC 861
Query 58154 GACGCGGGATCGCATCTTGGAC--ATTATCACCGAGGCGGTCGCGATCGAAAATGAG-TT 58210
| | | | | ||| || || ||||| || || | || ||||| ||| |
Sbjct 862 CCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAA-GAGATA 920
Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270
|||| || |||||||| || | ||||||||||||| || |||||||||| ||||
Sbjct 921 CTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTA 980
Query 58271 CATTGAGTTTGTTGCCGACAGACT 58294
| ||||||||||| || |||||
Sbjct 981 TGTCGAGTTTGTTGCAGATAGACT 1004
>seq5022
Length=2556
Score = 120 bits (132), Expect = 3e-22
Identities = 329/504 (65%), Gaps = 0/504 (0%)
Strand=Plus/Minus
Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514
|||||| ||||| | || | |||||||| || ||||| ||||| || || || || ||
Sbjct 915 ATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAAC 856
Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC 23574
|| | || ||||| || | || || | ||| || | | || ||||| | ||
Sbjct 855 ATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATT 796
Query 23575 TACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC 23634
|| || | | ||||| ||| || || || || | || || || || || ||
Sbjct 795 AGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACC 736
Query 23635 GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC 23694
| | ||| || |||| || |||| ||||| ||| || ||||| || || ||| ||
Sbjct 735 AGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATC 676
Query 23695 CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAA 23754
|| || | || || |||||||| ||||||||||| | | || ||| | | |||
Sbjct 675 GTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAA 616
Query 23755 CAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC 23814
|| || || || || || || || | || ||||| | ||| || || || || |
Sbjct 615 AAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAAC 556
Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874
| |||||| || || || || ||||| | ||| || | ||| || | | ||| || ||
Sbjct 555 AGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCT 496
Query 23875 CTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934
||| | | || || ||| | || ||||| | || | ||||| || |||||
Sbjct 495 TTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAA 436
Query 23935 ATAGTCATAGTTAAAGTCACGATC 23958
||||| ||| || ||||| | |||
Sbjct 435 ATAGTTATAATTGAAGTCTCTATC 412
>seq730
Length=387
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || ||||| | || || || || || ||| | || |||||| | ||
Sbjct 1 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 60
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || | || || |||||||| | || || |||||
Sbjct 61 GACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAA 120
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | || || || || || || || || ||||| || ||| | ||| || |||
Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAAC 180
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| ||||| || ||||| |||| | ||| |||| || ||||
Sbjct 181 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTA 229
>seq2706
Length=450
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || || ||| | || || || || || ||| | || || || | ||
Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | ||||| | ||| ||||||||||| | || || |||||
Sbjct 61 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 120
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | || || || || || || || || ||||| || ||| || || || |||
Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 180
Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395
|||||||| ||||| ||||||||
Sbjct 181 ATTCAAAAGGAATCTACTCTTCA 203
>seq2598
Length=450
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || || ||| | || || || || || ||| | || || || | ||
Sbjct 1 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 60
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | ||||| | ||| ||||||||||| | || || |||||
Sbjct 61 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 120
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | || || || || || || || || ||||| || ||| || || || |||
Sbjct 121 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 180
Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395
|||||||| ||||| ||||||||
Sbjct 181 ATTCAAAAGGAATCTACTCTTCA 203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445734148800960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |