Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17]
5,788 sequences; 7,246,798 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq4829 282 5e-71
seq5022 228 1e-54
>seq4829
Length=1098
Score = 282 bits (312), Expect = 5e-71
Identities = 566/833 (68%), Gaps = 12/833 (1%)
Strand=Plus/Minus
Query 33342 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAAT 33401
|| || || ||||| || || || ||||| ||||| | ||| | |||| | | || |||
Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014
Query 33402 TCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATT 33461
|| | | ||||||||| || || || | ||| ||||| || ||||||
Sbjct 1013 GCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATA 954
Query 33462 CCTATGAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATT 33520
|| | | || || || || || |||| ||| | |||| |||||| || || |
Sbjct 953 CCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTC 895
Query 33521 TGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAA 33580
|| || || ||| || ||| ||| || | ||| |||||| ||| | |||
Sbjct 894 GGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAA 835
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
||| || |||||| || | ||| || ||||||| ||| | ||||| || ||||| |
Sbjct 834 ACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAA 775
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
|| ||||| | || | |||||| | ||| || ||||| || ||||| || || |||||
Sbjct 774 ACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAA 715
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT-- 33758
|| ||||| || |||||||| || | | |||||| || | || | || |
Sbjct 714 AATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGC 655
Query 33759 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817
||||| ||| |||||| |||||||| | || | ||| || || ||||| || |||||
Sbjct 654 AATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATT 595
Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877
|| | | | |||| || |||||| | |||||||| ||||| | | ||| |
Sbjct 594 GAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGT 535
Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937
|||||||||||||||||| || || || || || ||||||||| ||||||| | |||
Sbjct 534 TTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAAT 475
Query 33938 CTGCACTTCTGT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCT 33995
|| || || | | ||| || || ||||||||||||| ||||| |||||| ||
Sbjct 474 TTGAACATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCA 417
Query 33996 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTC 34052
||||| ||||| | || | || || || |||| | | | | | || |||
Sbjct 416 GCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTC 357
Query 34053 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 34112
||||||| | |||||| || | ||| | ||| ||| | ||||| || ||||| ||||||
Sbjct 356 CAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCC 297
Query 34113 TTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165
|| || ||||| | ||| || || ||||| | |||||| || | |||||| ||
Sbjct 296 TTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244
>seq5022
Length=2556
Score = 228 bits (252), Expect = 1e-54
Identities = 777/1195 (65%), Gaps = 31/1195 (3%)
Strand=Plus/Minus
Query 62039 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 62098
||| | |||||||||||| | || | || | | || | || || ||||| || ||
Sbjct 2184 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 2125
Query 62099 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 62158
|| || || |||| || || |||||||| ||||| ||| | ||||
Sbjct 2124 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 2065
Query 62159 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62218
| | |||||| ||||||||||| ||||| | | | || || || || ||||||||
Sbjct 2064 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 2005
Query 62219 TTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62277
| || || |||||||| | || ||||| | ||| ||||| || || ||| || ||||
Sbjct 2004 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 1946
Query 62278 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCT 62334
|||| || | || |||||||| || ||| |||| || || || || ||
Sbjct 1945 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 1886
Query 62335 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGA 62394
||||||||| | | | || |||| |||| | | || ||||| || | ||||
Sbjct 1885 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 1826
Query 62395 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCAT 62454
|||| || | || ||||| | || ||||||||| || || ||||| | | || |
Sbjct 1825 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 1766
Query 62455 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62514
| | || | |||||||| ||||| ||||||||||| ||||| || | || |||||
Sbjct 1765 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 1706
Query 62515 TAAGACCGTATGTTCTGATTTTATCTTTTAGATG-TTCCCAATTCCAAAGATCCGACGGT 62573
| | ||| | | ||||||| || |||| ||| ||||| | | | | | ||
Sbjct 1705 TCAAACCATTGGCCTTGATTTTCTCCTTTA-ATGAATCCCAGTCATATAAGTTGGTTGGC 1647
Query 62574 ACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 62633
| | | ||||| | ||| | || |||||| || | ||
Sbjct 1646 TTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGTC 1587
Query 62634 TCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATG 62693
||||||||||| ||| | || || || | ||| ||||| || ||| | | |||||||
Sbjct 1586 TCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAATG 1527
Query 62694 GTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT-TTAA 62752
|||||||| || | |||| || || | |||||| || ||||||||| |||| | ||
Sbjct 1526 GTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCAA 1468
Query 62753 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62812
| || || || || || || ||||| ||||||| | | || ||||| | |||| ||||
Sbjct 1467 CATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATATT 1408
Query 62813 AGA---GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-GAGAT 62868
|| || ||| ||| || |||||| || || |||| || |||||||| || |
Sbjct 1407 TGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGTT 1351
Query 62869 TTCTGACAATTACTTTG--ACCACAT---CCTTC----AGTTTGAGAAAATCAAATC-GC 62918
|| | || ||||| | ||| |||| |||| | | | || ||
Sbjct 1350 TTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTT--ATACCAACAGTTCTTG 1293
Query 62919 CCATCTATTACAA-ACATG--TTCAATGCAACAGATGCCAGATTACACACGGCTACCTCA 62975
|||| || ||| | ||| |||||||||| || | |||||| || ||| ||
Sbjct 1292 TCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCC 1233
Query 62976 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 63035
| || | ||||| | || ||| ||| | ||| | | |||||| || |||
Sbjct 1232 TCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAA 1173
Query 63036 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63095
|||||||||||| || |||||||| ||||||||||| | ||||| || |||||||||
Sbjct 1172 TTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTT 1113
Query 63096 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 63155
||| | |||| ||||| |||| | ||| | | | || || ||| | || |
Sbjct 1112 TCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCT 1053
Query 63156 CTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACAT 63210
|| | ||||||||| ||| ||||| ||| || ||| || || || | ||||
Sbjct 1052 CTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACAT 998
Score = 219 bits (242), Expect = 5e-52
Identities = 570/865 (66%), Gaps = 7/865 (1%)
Strand=Plus/Minus
Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427
|||||| |||||||| || || | |||| || | | ||||| | ||| || || ||
Sbjct 924 AATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACC 865
Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487
|| || | || || || ||||||||| | || || | |||||||||||| || || ||
Sbjct 864 TTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGA 805
Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547
| ||||||| ||||||| ||||| ||| | | | ||||||| || || ||
Sbjct 804 TGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCC 745
Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTC 63607
|| || || || |||| || || || || ||| ||| || || |||||||| |||||
Sbjct 744 AATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTC 685
Query 63608 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCC 63667
||| ||| || |||| || || ||||| ||||||||| | | | ||| ||
Sbjct 684 AATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACC 625
Query 63668 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63727
|| ||| || | || |||||||| || || || | | | || | | ||| || ||
Sbjct 624 CGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGT 565
Query 63728 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63787
|||||| | || || ||||| |||||| || || || || | ||||| | ||
Sbjct 564 TTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATG 505
Query 63788 CTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63847
|| || ||||| |||| || |||||| | || | || |||| || |||||
Sbjct 504 TTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTT 445
Query 63848 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATC 63907
|||||||||||||| || ||||||| || ||| ||| | || | |||
Sbjct 444 GAAACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATT 385
Query 63908 CTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATT 63967
| || ||| | || || ||| || ||||||| || |||| | |||| |||||
Sbjct 384 CGCATTTTTTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATT 325
Query 63968 TTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 64027
|||||||| || ||| | ||| | | | |||||| ||| || ||||||
Sbjct 324 TTTAGGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTG 265
Query 64028 CTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG--TTG- 64084
||| |||| ||||| || || | ||| || || | | |||||||| ||||| | |
Sbjct 264 CTTTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGT 205
Query 64085 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 64144
||| || || || || |||| || || | | | || ||||| || ||||| || ||
Sbjct 204 TGTCATATAA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACC 148
Query 64145 ATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTT 64204
|| ||| | || ||||| |||| || ||| | ||||| | || | ||
Sbjct 147 ATCATAAACACCAGAAATAATCTTCTGAGTAATTGCAGAAGGATGCACGTGTCTTGAGTC 88
Query 64205 TAAGCCATAGCACAATTT-TCTAAT 64228
||| ||||| |||||| ||||||
Sbjct 87 TAAACCATATGCCAATTTCTCTAAT 63
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629772032696640
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