Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4829 284 1e-71 seq5022 233 2e-56 seq5463 172 5e-38 >seq4829 Length=1098 Score = 284 bits (314), Expect = 1e-71 Identities = 574/840 (68%), Gaps = 20/840 (2%) Strand=Plus/Minus Query 11387 AGTGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCT 11446 || || || | |||||||||| || ||||| || | | | || |||||||||||| Sbjct 1076 AGGGAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCT 1017 Query 11447 AACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTC 11506 || | | | || ||||||||| || || || | ||||||| |||| ||| |||| Sbjct 1016 AATGCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTC 957 Query 11507 ATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCA 11566 ||||| | | | || || | || | || || | |||||| |||| ||| || Sbjct 956 ATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTTCAATATCAACGGCT 897 Query 11567 TC---AATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAAC 11623 || ||||||| | | | | || || | ||| | ||| |||||| ||| Sbjct 896 TCGGTAATGATTT--GTC-TGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAG 840 Query 11624 ATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAAT 11683 | ||||| |||||||| |||||||||||| ||||||| || || || || || || Sbjct 839 AGCAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAAC 780 Query 11684 GTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAA 11743 || || || |||||||| |||| ||||| | ||| || || | |||||||||||||| Sbjct 779 GTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAG 720 Query 11744 AAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCA---TATACCTTGTTG 11800 ||||| || || || ||||| |||||||| || | || ||| || || | | || Sbjct 719 AAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTA 660 Query 11801 CTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATA 11860 | ||||||||| ||||| || || || | || | ||| |||||||| || Sbjct 659 TCTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATT 600 Query 11861 GCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAAC 11918 || || |||| ||| || |||| | |||| | | || ||||| || |||||| Sbjct 599 GCATTGAATAAGAATTCA--CTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAG 542 Query 11919 TATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCT 11978 ||| |||| |||||||| |||||||| ||||| || |||||||||||| |||| Sbjct 541 AATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCT 482 Query 11979 CTGAACACTGTACATCCACAT-AAAATCTTTCCGCTAAATTCTCATTTACAATACCATCA 12037 ||| | || |||| ||| | | || | || ||||||| ||||| || ||||||||| Sbjct 481 CTGGAATTTGAACAT-CACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCA 423 Query 12038 CTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTT-AAT-- 12094 || ||||| || ||||| | | || ||| || |||| | ||| ||| ||| Sbjct 422 GAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCAT-TTTCGTTCAATCT 364 Query 12095 -TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGC 12153 || | |||||||| |||||||| || | ||| | ||| || | ||||| ||| ||| Sbjct 363 ATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGC 304 Query 12154 CACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCT 12213 ||| | || ||||||| ||| || || |||||||| || || || | ||| ||||| Sbjct 303 TTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 >seq5022 Length=2556 Score = 233 bits (258), Expect = 2e-56 Identities = 538/808 (67%), Gaps = 17/808 (2%) Strand=Plus/Minus Query 36826 GTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTG 36885 ||||| | |||||||| || || || |||||| |||| || || |||||||| Sbjct 2147 GTTCTAAGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGAC 2088 Query 36886 GTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCTATA 36945 || | ||| | ||| ||||| | | || || |||| ||||| ||||| | Sbjct 2087 GTTAATTTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACG 2028 Query 36946 AACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTT 37005 | |||||||| || || ||||| || | ||| ||||| || |||||||| || || Sbjct 2027 TATGCACCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTC 1968 Query 37006 TTATATATTTGTTTTATATTATCTGGTAAATC---TAAATGTTGAATAGAACCATTATGT 37062 ||||||| | || || | | || | || ||| | ||||| |||||||||| | Sbjct 1967 TTATATAAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCT 1908 Query 37063 AACACAATTGTATTCTTTATGTCATTATTCCACAT----ATTTCTACTTATTAGTTCTCT 37118 | | || || || || || |||||| | ||||| ||| | | |||| Sbjct 1907 GAGATGATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAAT----CTCT 1852 Query 37119 CAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATT 37178 ||| | | || || |||| ||| || || || | ||| |||||||| | || ||||| Sbjct 1851 CAACATATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATT 1792 Query 37179 GCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGG 37238 | ||| || ||||||| | | || || | || || ||||||||||| || ||||| || Sbjct 1791 GGAAGTGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGG 1732 Query 37239 CATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTC 37298 ||||||||| | || | ||||||||| |||| | || ||| ||| |||| | Sbjct 1731 CATTGGTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGA 1672 Query 37299 ATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTT 37358 || ||| || |||| | ||||| ||||| ||| | |||| | ||||| | ||||| Sbjct 1671 ATCCCAGTCATATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTG 1612 Query 37359 ACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACT 37418 || ||||| | | | | |||||||| ||||| | | ||| || ||| ||| Sbjct 1611 GGATGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACT 1552 Query 37419 AGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTC 37478 | || | || |||| ||| || ||||| |||||||| ||||| | | |||||||| Sbjct 1551 TGCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTC 1492 Query 37479 TTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGAT 37538 | ||| |||| | | ||| | || || |||| |||||||| || ||||| | Sbjct 1491 TGGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAAC 1432 Query 37539 ACCTATGGGTCTATGTTTCTTATTAGAT---CTAGACGATTCTATCACTGGATAATAATT 37595 | | || ||||| | | || |||| ||| || | | ||| || ||||| || || Sbjct 1431 AGCAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTT 1375 Query 37596 GATATCTATTATTTTATTTAGATTTTTA 37623 |||| || |||||||| | |||||| Sbjct 1374 TCTATCGATGATTTTATTCAAGTTTTTA 1347 Score = 203 bits (224), Expect = 3e-47 Identities = 380/554 (69%), Gaps = 12/554 (2%) Strand=Plus/Minus Query 38109 AAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTT 38168 |||||| | ||||| | ||||| || || ||||| | | | || || |||||||| Sbjct 933 AAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTT 874 Query 38169 ATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTAT 38228 || ||| || || | || ||| || | ||||||||| | | || | ||| || | || Sbjct 873 ATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAAT 814 Query 38229 ACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTAT 38288 ||||| ||| | || || |||||| ||||||| ||| | | || |||||| ||| Sbjct 813 CCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTAT 754 Query 38289 CGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAA 38348 || || || ||||| ||| ||| || || ||||| |||| ||| || |||||| | Sbjct 753 ATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATA 694 Query 38349 TATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAA 38408 |||||||| || || ||||| |||| | || ||||| |||||||||| Sbjct 693 GATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCT 634 Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 |||||| || | || || | || ||||| |||||| |||| | | | |||| | Sbjct 633 TGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAA 574 Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528 |||||| ||||| || ||| ||| |||||| | || |||||||| | | || ||||| Sbjct 573 ATTATAAGTTTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCAT 514 Query 38529 TAGCATATGTTGTGGTCTTTCTATTATTTTA----TTATTCTGTTTAAGTAGATACGATT 38584 || | |||||| || ||||| || ||| ||||||| ||| ||||| Sbjct 513 TATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTTATTCT---TAAA-AGATAACTCC 458 Query 38585 TTTCTAATGTTTTTATTCCAAAATAACTATA--TGAATAATCTCTATCGTATGCTATTAC 38642 ||||||||||||| | |||||||| |||| ||| | |||||||| || ||| | Sbjct 457 TTTCTAATGTTTTGAAACCAAAATAGTTATAATTGA--AGTCTCTATCATAATGAATTGC 400 Query 38643 ATTATCGATTATAT 38656 || ||| | ||||| Sbjct 399 ATCATCTAATATAT 386 >seq5463 Length=2400 Score = 172 bits (190), Expect = 5e-38 Identities = 430/646 (67%), Gaps = 24/646 (4%) Strand=Plus/Minus Query 37916 TTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATA-CA-TCGCATAATCCTGG 37973 |||| |||| || ||| ||||| ||||| |||| | ||||| || ||| || ||||| Sbjct 1144 TTTCATATTTTACATACAATTTATTAAACTCAT--CACCATAACACTCGGTTAGACCTGG 1087 Query 37974 ACATTCGCATG--GACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAAT 38031 || ||| || || | | || | |||| ||||||||| |||| || ||||| || Sbjct 1086 AC--TCGAATCCTGAGAAAATAAACACCAATCTTCATCTCTTTCCACTTTCTCCATGAAC 1029 Query 38032 AAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACA 38091 | ||| || | ||||| ||| ||||||||||| | | ||| |||||| ||||| | Sbjct 1028 ATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTTCCCATGA 969 Query 38092 TTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGAC 38151 ||||| || | | ||||| || || | |||| | |||||||| |||| ||| || | Sbjct 968 TTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATATATGCAA 909 Query 38152 ATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATT 38211 | ||| ||||||||||| | || ||||| | || |||| | || ||| ||| | Sbjct 908 AATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAATTGAATACT 849 Query 38212 CTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTA 38271 |||||||||| | || ||| || | || || ||||| || |||||||| | Sbjct 848 TTTAACATAGGGATTAAACCGGATGAAATCCCATTACTACCGTTGATGTAAGTACCACTG 789 Query 38272 GCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCAT 38331 |||| ||||||| | |||||| || ||||| || | | || || | ||| Sbjct 788 GCTCTTATATTAGAGACATGCAATCCAATACCACCAGCTGATCTCGAGATCATAGCTGTA 729 Query 38332 TGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAA 38391 | | || ||| | | |||| || || ||| ||| || || || | | | ||||| Sbjct 728 TCATATAGCGTTTTATATATGCCATCGATAGAGTCGTCTTTCATAGCCAACAGGAAACAT 669 Query 38392 CTAGACATTTGAGGCAATGGAGTT------CCGGCGTTAAATAATGTAGGAGATGCATGT 38445 ||| | ||||| ||| | || || || | || ||||| ||||| Sbjct 668 GAAGATA------AAAATGGGGTTCTTAAACTTGCATTGAAAAGAGTTGGAGAGGCATGA 615 Query 38446 ATGAACCATTTTTCCGACAAATAA--TTATATGTTTCTATTACATCATCTATATCACCGC 38503 || || || |||| |||||| | |||||||||||| || |||||| ||| || Sbjct 614 ATAAA--ATATTTCTTGGAAATAAGCTCATATGTTTCTATAGCACTATCTATGTCAGTGC 557 Query 38504 CGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 |||| ||||||| || || ||||| | || | ||| || |||| Sbjct 556 CGTGGATACCTAAAGCCACTCTCATAAACAAAAATTGCGGAGTTTC 511 Score = 127 bits (140), Expect = 2e-24 Identities = 439/676 (65%), Gaps = 9/676 (1%) Strand=Plus/Minus Query 36797 TGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCC 36856 |||||| ||||| ||||| ||||| | ||||||| | |||||||||||| || || | || Sbjct 2233 TGAATTGTATAGCATTTGCTGCCGCTCTTGTTCTTAAATAATACATTCCGGTCTTCAACC 2174 Query 36857 CCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATAT 36916 | |||| | || |||||||| ||||| | ||| | | | || | ||| Sbjct 2173 CTTTCTTCCACGCATAGAAATGCATGCTGGTTAATTTAGAAAACGAGACATCCTGAATAA 2114 Query 36917 ATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAA 36976 | | |||| || ||| || ||||| | | || || ||||| | || | || Sbjct 2113 ACAAATTCATACTCTGTGATTGGTCAATAAAGGGGGCCCTATCTGCTGCTAAGTCAATAA 2054 Query 36977 TACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAAT 37036 | ||| || ||||| |||||||| || || || | ||| || | | ||| || | Sbjct 2053 CAACTTTCTGTGATATTTCCCAAACAGTCTTGTAAAGGCTTTTAATTTCTTTTGG-AATT 1995 Query 37037 C--TAAATG--TTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTC 37092 | | ||| ||| || || ||| || ||| | |||| ||| || | ||| ||||| Sbjct 1994 CCTTCAATAGCTTGGATGGAGCCACGATTTAATAGAATTTGATTTTTCAAATCAGTATTC 1935 Query 37093 CACATATTTCTACTT-ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCC 37151 |||| | | |||| | ||| || | || || | |||| ||||||||| ||||| Sbjct 1934 CACAAACC-CAACTTCACTAGGTCGTCGACTAAGTATCGATTAACAACCTGATGTTCTCC 1876 Query 37152 AGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACT 37211 ||||| || | | ||||||||| || |||||||| | |||| || | Sbjct 1875 GGATAAGACCCGACGAAGGTATATATTGGATGTTATTGGTTCAAAGCACTCTGTAAAGCC 1816 Query 37212 TAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCC 37271 || ||||| || || || |||||||||||| || | || | ||||| | || Sbjct 1815 AAAAATTTGCGAAGTGGACGCAGTAGGCATTAAAGCCACAAGTAATGAATTTCGAACGCC 1756 Query 37272 ATGTGTATTAAT-TCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTA 37330 |||| || ||| | ||| || | || ||||| ||||||||||| || || || Sbjct 1755 ATGTTTAGCAATCTTTCTCTTCAATGTC-TTCCAGTCCCATAAATCGGTAGGCTTAGCCC 1697 Query 37331 ACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAG 37390 ||| | |||||||||||| | || | | ||||| | | |||||| |||||| Sbjct 1696 CCCATAAATCATATTGTAGTTTTCCCTGCGACATAGGAGAGCCATCATATGTTCCATAAG 1637 Query 37391 GTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGA 37450 ||| | || ||||||| || ||||| || ||| || || ||||||| Sbjct 1636 TTCCATGTTCTTGGGCTAGTTTACAGGATTGTTCTAAAGCACCATGGTAGATGGTTTCGA 1577 Query 37451 AAATTTGTATATTTAA 37466 | ||||| || || || Sbjct 1576 AGATTTGAATGTTCAA 1561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468490902230720