Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001879685.1_202016-11-17] 5,788 sequences; 7,246,798 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4829 315 9e-81 seq5022 212 8e-50 seq5463 89.7 7e-13 >seq4829 Length=1098 Score = 315 bits (348), Expect = 9e-81 Identities = 573/833 (69%), Gaps = 12/833 (1%) Strand=Plus/Minus Query 35918 GATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAAT 35977 || || || ||||| || ||||||||||| |||| | || | |||| | | || ||| Sbjct 1073 GAAATGTTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAAT 1014 Query 35978 TCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 36037 || | | ||||||||| ||||| || | ||| ||||| || |||||| Sbjct 1013 GCAATCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATA 954 Query 36038 CCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTC 36096 || | | || || || || || |||| ||| | |||| ||||||| || || || Sbjct 953 CCGAGCAAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTC 895 Query 36097 TGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAA 36156 || || || | | || ||| ||| || | || |||||| ||| | ||| Sbjct 894 GGTAATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAA 835 Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 ||| || |||||| |||| ||| || ||||||| ||| | |||||||| ||||| | Sbjct 834 ACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAA 775 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276 || ||||| | || | |||||| | ||| || ||||| |||||||| ||||| ||||| Sbjct 774 ACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAA 715 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT-- 36334 ||| ||||| || || ||||| || | | |||||| || | ||| | || | Sbjct 714 AATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGC 655 Query 36335 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393 ||||| ||| |||||| |||||||| | || | ||| || ||||| || || ||||| Sbjct 654 AATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATT 595 Query 36394 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 36453 || | | | |||| || |||||| | || ||||||||||| | | ||| | Sbjct 594 GAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGT 535 Query 36454 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 36513 |||||||||||||||||| || ||||| || || ||||||||| ||||||| | ||| Sbjct 534 TTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAAT 475 Query 36514 CTGTACTTCTGT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 36571 || || || | | ||| || || ||||||||||||| ||||| || ||| || Sbjct 474 TTGAACATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCA 417 Query 36572 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TTATTC 36628 ||||| ||||| | || | || || || |||| ||| | | | || ||| Sbjct 416 GCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTC 357 Query 36629 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 36688 ||||||| | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||| Sbjct 356 CAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCC 297 Query 36689 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 36741 || || ||||| | ||| || || ||||| | |||||||| | |||||| || Sbjct 296 TTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 244 >seq5022 Length=2556 Score = 212 bits (234), Expect = 8e-50 Identities = 781/1209 (65%), Gaps = 33/1209 (3%) Strand=Plus/Minus Query 64832 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 64891 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 2184 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 2125 Query 64892 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 64951 || || || |||| || || |||||||| ||||| ||| | |||| Sbjct 2124 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 2065 Query 64952 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 65011 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 2064 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 2005 Query 65012 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 65070 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 2004 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 1946 Query 65071 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 65127 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 1945 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 1886 Query 65128 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 65187 ||||||||| | | | || |||| |||| | | || || || || | || | Sbjct 1885 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 1826 Query 65188 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 65247 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 1825 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 1766 Query 65248 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 65307 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 1765 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 1706 Query 65308 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 65365 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 1705 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 1646 Query 65366 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 65425 | || ||||| | ||| | || |||||| || | || Sbjct 1645 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 1588 Query 65426 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 65485 || |||||||| ||| | || || |||| ||| ||||| || ||| | | |||||| Sbjct 1587 CTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 1528 Query 65486 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT-TTA 65544 |||||| || || | |||| || || | |||||| | ||||||||| |||| | | Sbjct 1527 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 1469 Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604 | | || || || ||||| || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 1468 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 1409 Query 65605 TAGA---GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-GAGA 65660 | || || ||| ||| || |||||| || || |||| || |||||||| || Sbjct 1408 TTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 1352 Query 65661 TTTCTGACAATTACTTTG--ACCACAT---CCTTC----AGTTTGAGAAAATCAAATC-G 65710 ||| | || ||||| | ||| |||| |||| | | | || || Sbjct 1351 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTT--ATACCAACAGTTCTT 1294 Query 65711 CTCATCTATTACAA-ACATG--TTCAATGCAACAGATGCCAGATTACAAACGGCTACCTC 65767 ||||| || ||| | ||| |||||||||| || | ||||||||| ||| || Sbjct 1293 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 1234 Query 65768 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 65827 | || | ||||| | || ||| ||| | ||| | | ||||| || || Sbjct 1233 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 1174 Query 65828 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 65887 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 1173 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 1114 Query 65888 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 65947 |||| | |||| ||||| |||| | ||| | | | || || ||| | || Sbjct 1113 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 1054 Query 65948 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 66007 ||| ||||||||| ||| ||||| ||| || ||| || || || | |||| Sbjct 1053 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 994 Query 66008 CAATCCAGG 66016 ||| ||||| Sbjct 993 CAAACCAGG 985 Score = 206 bits (228), Expect = 4e-48 Identities = 519/786 (66%), Gaps = 6/786 (1%) Strand=Plus/Minus Query 66161 AATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220 |||||| ||||||| || || | |||| || | | ||||| | ||| || || || Sbjct 924 AATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACC 865 Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280 || || | || || || ||||||||| | || || | |||||||||||| |||||||| Sbjct 864 TTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGA 805 Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACC 66340 ||||||||| || |||| ||||| ||| ||| | ||||||| || || || Sbjct 804 TGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCC 745 Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 66400 || || || || |||| || || || || ||| ||| || ||||||||||| || || Sbjct 744 AATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTC 685 Query 66401 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 66460 || ||| ||| |||| || || ||||| ||||||||| | | ||| || Sbjct 684 AATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACC 625 Query 66461 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 66520 || ||| || | || |||||||| || || || | | | || | | ||| || || Sbjct 624 CGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGT 565 Query 66521 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 66580 |||||| | || || ||||| |||||| || || || || | ||||| | || Sbjct 564 TTCAATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATG 505 Query 66581 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 66640 || || ||||| | ||||| |||||| | || | || |||| || ||||| Sbjct 504 TTGGGGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTT 445 Query 66641 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 66700 |||||||||||||| || ||||||| || ||| ||| | | | | ||| Sbjct 444 GAAACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATT 385 Query 66701 CTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATT 66760 | || ||| | || | ||| || ||||||| || |||| | |||| ||||| Sbjct 384 CGCATTTTTTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATT 325 Query 66761 TTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTC 66820 |||||||| | ||| | ||| | | | |||||| ||| || |||||| Sbjct 324 TTTAGGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTG 265 Query 66821 TTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG--TTG- 66877 || |||| ||||| | || | |||||| || | | |||||||| ||||| | | Sbjct 264 CTTTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGT 205 Query 66878 TGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 66937 ||| || || || || |||| || || | | | || ||||| || ||||| || || Sbjct 204 TGTCATATAA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACC 148 Query 66938 ATTATA 66943 || ||| Sbjct 147 ATCATA 142 >seq5463 Length=2400 Score = 89.7 bits (98), Expect = 7e-13 Identities = 180/264 (68%), Gaps = 10/264 (4%) Strand=Plus/Minus Query 66068 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTT 66127 ||| || | ||| |||||||| ||||| |||||||||||||| | ||| ||| || || Sbjct 1035 CATGAACATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTT 976 Query 66128 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTA 66187 || |||||| | | || ||| || | | || |||| |||||| || || || || Sbjct 975 CCCATGATTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATA 916 Query 66188 TATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 66245 |||| || || | || || | ||||||||| ||||| || | ||| || || | Sbjct 915 TATG--CAAAATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAA 858 Query 66246 TTATAAACTCTCAACATTGGAATAATACCATTGGATG---TACCATTGGTCCCGGAGATA 66302 || | ||| | ||||| || || | ||| ||||| | ||||| | ||| ||| Sbjct 857 TTGAATACTTTTAACATAGGGATTAAACC---GGATGAAATCCCATTACTACCGTTGATG 801 Query 66303 TAGCTTCCACTTGCACGAATATTA 66326 || | ||||| || | |||||| Sbjct 800 TAAGTACCACTGGCTCTTATATTA 777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658125181197920